Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0686 |
Symbol | |
ID | 6374351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 721511 |
End bp | 723781 |
Gene Length | 2271 bp |
Protein Length | 756 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 642683199 |
Product | conjugal transfer coupling protein TraG |
Protein accession | YP_001959125 |
Protein GI | 189499655 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAATA CTCGGACGAT TAATGTGTTT TACAGCCATG TGAGCGCCGG TTTAGTGTTC ACTCTCTTGG GGATGTGGTG TTCAACACAG TATGTGGCCT ATGCTCTTGG TTATCAGCCA GCGCTTGGAA AACCTGTTTT TATCCTGAAT GGCTATCCTC TTTATGAACC TTGGTTGTGG ATGTACTGGG CTTATCATTT CGAGCCGTAT GCTCCTCAGG TGTTTGATAT GGCCAGCTGG ATAACCTATA CCAGTTTCTT TGTCATGTTT GGTCTCATGG TTGTCCTTGC GATTCGCAGG GCACGATATC GTTCAGCATC AGGCGTCTAT GGAACAGCAC GTTGGGCCAA CAGAAAAGAG CTTGAAAGGG TAGGGCTGCT TGAAGACAAG GGAGTGATTC TCGCGCAAGG CAACGATGCA AAATTTCATT CGGTCGTCAA GACAGATGCT TCCGGTGATG TCAATGTTCA GTGGGTCATG GACCGGGAGG GCAAGGAAGT ACTTCGCCAT AACGGCCCTG AGCATGTGTT CTGCTTTGCC CCGACGCGAT CAGGTAAGGG GGTGGGACTG GTTATTCCAA CATTGCTGAC ATGGACAGGT TCCTGTGTGG TATACGATAT CAAAAAAGAA AACTGGGCAG CAACATCCGG TTGGCGCAGG AAGTTCTCTC ACTGCTTGCG GTTTGAGCCC ACAACACCGG GGTCAGTCCG GTTCAACCCC CTGCTCGAGA TCCGCAAGGG TCTCTATGAG GTCAGGGATG CACAAAATAT CGCGGATATT CTTGTTGATC CAGAGGGTTC ACTCGAAAGA AGAGATCACT GGGATAAAAC CGCACACACC ATTTTTGTCG GCGCCATTCT GCATATCCTC TATGCGGAAA AAGACAAGAG CATCGCCGGG TTGGTAGGGT TTCTTTCAGA TCCTGATCGC TCCATAGAGG AAACCCTGCA CTACATGCTC AACACTCAGC ACTTGACGAA TGCGCCGCAT CCGGTTGTAG CAAGTTGCGC ACGTGAGGCA CTTAACAAGT CTCCCAATGA GTTGTCCGGC GTGATCTCGA CAGCGATGAC CTTTCTGGCG CTGTTTCGTG ATCCGATTAT CGCAGAGAAC ACGGCGGTGT CAGATTTTCA TATCGAGGAT CTCATGAATT CCAGGCGACC GGTATCGCTG TACATCGTTG TTCCCCCATC AGATATAGAT CGAACCAAGC CATTGATCAG GCTGATTCTT AACCAGATGG GACGGAGGCT CACCGAAAAG ATGACATTCA GGCAGATGAA AAGTGGGAAG GATGCGTCAG CGCTGAATGT TCTGCTGAAG AATATGCAGC GTCCTAACGA TAAACTGACA GCTCAGAAAG AACAACCGAA ACACAGAATG CTGTTGATGC TTGATGAATT TCCAAGCCTT GGACGATTGA GCTTTTTTGA AACCGAACTG GCCTATCTGG CAGGCTATGG GATCAAGTGC ATCATGATTT CCCAAAGTTT GAATCAGATA GAAAAAGCAT ATGGTCAGAA CAACTCGATT CTGGATAACT CCCATGTTCG AATTACCTAT GGAGCATTGG ACGAGCGTAC GGCAAAAAGG ATTTCCGACC TGCTGGGACA GGCGACGGAA AAACGGCGGC AGATGAACTT TGCTGGTAGC AGGCTTGCGC CATGGCTTGG TCACGTGATG GAAACTGAAC AAGAAAGTCC AAGGCCGTTG CTCACGCCCG GTGAAATTTT GCAGTTGCCG GGAGATGATG CTCTGTTGAT GGTTGGCGGT ATTCCACCCT ACAGGGCAAA AAAAGTCATG TACTATCAGG ATGATCGTTT TAAAGAGCGT GCATGGCTGC CTGCTCCGGA TACCGATGAA GAACAGGTTG CTGAGTTGTT CAAGAGTCAG ACGCTGAGAA ATGACTGGTG CATCGATGAT GATCGCGATG TGGCATCAAT GCAGAATCAG CCAAACAAGG ATGTTCGTGA TGACGATGGA ATCACGCAGC CAGATCACTC TGGATCAGCG ATTGGTGGTA AAGAATGTGA AACCGGACAG GAGGATCAAA AGTGGGAAAA AGATCTTGAG AAAGATGCCA TTCTGCTTGC GCTTGAAGAG AAAGTGCTAT CCGACGAGAG TGAACAAAAA GCTCTGTTTG CATCAGCAAA TGAAGAGGCT GAATTGAGTC AAAACCAGAA GGTATTGCAG GAGAAGATGC GTAGGGCTCA GGAACGGAAC AGAAGCATTG AATTGTCAAG ATCACCCGGA GGAGGAGAAC TGCCATTATG A
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Protein sequence | MNNTRTINVF YSHVSAGLVF TLLGMWCSTQ YVAYALGYQP ALGKPVFILN GYPLYEPWLW MYWAYHFEPY APQVFDMASW ITYTSFFVMF GLMVVLAIRR ARYRSASGVY GTARWANRKE LERVGLLEDK GVILAQGNDA KFHSVVKTDA SGDVNVQWVM DREGKEVLRH NGPEHVFCFA PTRSGKGVGL VIPTLLTWTG SCVVYDIKKE NWAATSGWRR KFSHCLRFEP TTPGSVRFNP LLEIRKGLYE VRDAQNIADI LVDPEGSLER RDHWDKTAHT IFVGAILHIL YAEKDKSIAG LVGFLSDPDR SIEETLHYML NTQHLTNAPH PVVASCAREA LNKSPNELSG VISTAMTFLA LFRDPIIAEN TAVSDFHIED LMNSRRPVSL YIVVPPSDID RTKPLIRLIL NQMGRRLTEK MTFRQMKSGK DASALNVLLK NMQRPNDKLT AQKEQPKHRM LLMLDEFPSL GRLSFFETEL AYLAGYGIKC IMISQSLNQI EKAYGQNNSI LDNSHVRITY GALDERTAKR ISDLLGQATE KRRQMNFAGS RLAPWLGHVM ETEQESPRPL LTPGEILQLP GDDALLMVGG IPPYRAKKVM YYQDDRFKER AWLPAPDTDE EQVAELFKSQ TLRNDWCIDD DRDVASMQNQ PNKDVRDDDG ITQPDHSGSA IGGKECETGQ EDQKWEKDLE KDAILLALEE KVLSDESEQK ALFASANEEA ELSQNQKVLQ EKMRRAQERN RSIELSRSPG GGELPL
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