Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0641 |
Symbol | |
ID | 6374305 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 672072 |
End bp | 672482 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642683153 |
Product | transcriptional regulator, BadM/Rrf2 family |
Protein accession | YP_001959080 |
Protein GI | 189499610 |
COG category | [K] Transcription |
COG ID | [COG1959] Predicted transcriptional regulator |
TIGRFAM ID | [TIGR00738] rrf2 family protein (putative transcriptional regulator) |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.164699 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTCAT TGAGTGCCAA GGCACATTAT GGGTTGGCTG CAATGCTTGA TCTGGCAGAC AACTTCGGAA AGCAGAGGCT GCAGATCAGG CAGATTGTTG AGAAGAGAGG TATACCGAAA AATTATCTCG AACAGATTTT TAACCGTCTT GTAAAAAACG CTCTTGTCAA AAGCGTTCGG GGTAACAAGG GGGGGTATGA GCTTGCTCGG AGTCCGTCGA GCCTTACGGT TTTTTCTATT CTCGAAGCTC TCGAAGGGAA GCTGGAGATT GTCTCTGACC ATGATACGAA AGCAATGAGG CAGACGTTCG GAAATCTGGA GGACCTGGTA ATGGAGTATT TTTCCATGAC TCTCGAAGAG CTCATTGTTC AGGAGAAGAG GTTTTCACAA AAACAGATCT ACTACATTTA A
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Protein sequence | MFSLSAKAHY GLAAMLDLAD NFGKQRLQIR QIVEKRGIPK NYLEQIFNRL VKNALVKSVR GNKGGYELAR SPSSLTVFSI LEALEGKLEI VSDHDTKAMR QTFGNLEDLV MEYFSMTLEE LIVQEKRFSQ KQIYYI
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