Gene Cphamn1_0641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0641 
Symbol 
ID6374305 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp672072 
End bp672482 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content45% 
IMG OID642683153 
Producttranscriptional regulator, BadM/Rrf2 family 
Protein accessionYP_001959080 
Protein GI189499610 
COG category[K] Transcription 
COG ID[COG1959] Predicted transcriptional regulator 
TIGRFAM ID[TIGR00738] rrf2 family protein (putative transcriptional regulator) 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.164699 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTTCAT TGAGTGCCAA GGCACATTAT GGGTTGGCTG CAATGCTTGA TCTGGCAGAC 
AACTTCGGAA AGCAGAGGCT GCAGATCAGG CAGATTGTTG AGAAGAGAGG TATACCGAAA
AATTATCTCG AACAGATTTT TAACCGTCTT GTAAAAAACG CTCTTGTCAA AAGCGTTCGG
GGTAACAAGG GGGGGTATGA GCTTGCTCGG AGTCCGTCGA GCCTTACGGT TTTTTCTATT
CTCGAAGCTC TCGAAGGGAA GCTGGAGATT GTCTCTGACC ATGATACGAA AGCAATGAGG
CAGACGTTCG GAAATCTGGA GGACCTGGTA ATGGAGTATT TTTCCATGAC TCTCGAAGAG
CTCATTGTTC AGGAGAAGAG GTTTTCACAA AAACAGATCT ACTACATTTA A
 
Protein sequence
MFSLSAKAHY GLAAMLDLAD NFGKQRLQIR QIVEKRGIPK NYLEQIFNRL VKNALVKSVR 
GNKGGYELAR SPSSLTVFSI LEALEGKLEI VSDHDTKAMR QTFGNLEDLV MEYFSMTLEE
LIVQEKRFSQ KQIYYI