Gene Cphamn1_0630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0630 
SymbolglyA 
ID6374294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp662118 
End bp663440 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content52% 
IMG OID642683142 
Productserine hydroxymethyltransferase 
Protein accessionYP_001959069 
Protein GI189499599 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGAACA TGGATATCCT TCAGAGACAG GATAAGGGGA TTTTTGATGC AATAACCGCA 
GAGGTGCGTC GTCAGACAGA AACCCTTGAA CTGATTGCTT CGGAAAACTT TGCAAGCAGG
GCGGTTATGG AAGCCTGCGG GTCGGTTATG ACGAATAAAT ACGCTGAAGG ATACCCCGGC
AAACGGTATT ACGGCGGCTG TGAATTTGTC GATATCGCTG AAAACCTTGC CAGGGATCGG
GCTAAAAAGC TTTTCGGATG TGATTATGTG AACGTTCAGC CTCATTCCGG TTCCAGCGCA
AACATGGGTG TGCTTTTTGC CGTGCTTAAA CCTGGCGACA GGATTATGGG GCTTGATCTG
TCTCATGGCG GTCATCTGAC TCACGGCAGC AAGGTGAACT TTTCAGGGCA ACTTTTTGAG
GCACATTCCT ACGGAGTGGA TCGGGAGACC GGTTGCATCG ACATGAACAA GGTTGAGGAA
ATGGCTCTCG AAGTCCGGCC CAAACTGATT ATCTGTGGTG CCAGCGCATA CTCGCAAGGT
TTCGACTTCA AGGCATTCAG GGACGTTGCC GACAAGGTAG GTGCTTTTCT CATGGCCGAC
ATCGCGCATC CCGCCGGTCT TATTGCGGCA GGTCTTCTGA ATGATCCCAT GCCCCATTGT
CATTTTGTGA CCACCACGAC CCACAAGACG CTGCGCGGGC CTCGCGGAGG GATGATCATG
ATGGGCAAGG ATTTCGAGAA TCCTCTCGGA ATCACCGTAA AAACGAAAAA AGGATCACGT
ACGAAAATGA TGTCGGAGGT GATCGATGCC GAGATCATGC CCGGCATACA GGGCGGGCCG
CTTATGCATA TCATCGCGGC CAAGGGAGTC GCGTTCGGTG AGGCTCTGCA GCCGGAGTTC
AAGGACTACG CTGTACAGGT GCGCAATAAC GCTGCGGTTA TGGCGGAAAG GTTCAGCGGG
CTGGATTATC AGATCGTCAG CGGCGGAACC AAAAACCATC TTATGCTGAT AGATCTTCGC
AACAAGAATG TCACAGGAAA GGTGGCTGAA AATCTGCTGC ATGATGCCGG CATTACCGTC
AACAAGAATA TGGTGCCTTT TGACGATAAA TCACCGTTTG TAACGAGCGG TATCCGTATC
GGCACGCCCG CAATGACGAC GAGAGGCATG CAGGAATCTC ATGCGGAAAA TATTGTAGGG
TTCATCGACC GGGTGATCAG CGCGGCTGAC AGCGAGGGGA TCGAAAAGGT CTGCGCCGAG
GTGAGAAGTG ATGTGAAAGC GATGTGTAAG GATTTGCCGC TCAATGATTT CGGGCCGGAA
TAA
 
Protein sequence
MMNMDILQRQ DKGIFDAITA EVRRQTETLE LIASENFASR AVMEACGSVM TNKYAEGYPG 
KRYYGGCEFV DIAENLARDR AKKLFGCDYV NVQPHSGSSA NMGVLFAVLK PGDRIMGLDL
SHGGHLTHGS KVNFSGQLFE AHSYGVDRET GCIDMNKVEE MALEVRPKLI ICGASAYSQG
FDFKAFRDVA DKVGAFLMAD IAHPAGLIAA GLLNDPMPHC HFVTTTTHKT LRGPRGGMIM
MGKDFENPLG ITVKTKKGSR TKMMSEVIDA EIMPGIQGGP LMHIIAAKGV AFGEALQPEF
KDYAVQVRNN AAVMAERFSG LDYQIVSGGT KNHLMLIDLR NKNVTGKVAE NLLHDAGITV
NKNMVPFDDK SPFVTSGIRI GTPAMTTRGM QESHAENIVG FIDRVISAAD SEGIEKVCAE
VRSDVKAMCK DLPLNDFGPE