| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0610 |
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| Symbol | ispF |
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| ID | 6374274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 643704 |
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| End bp | 644183 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 642683123 |
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| Product | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| Protein accession | YP_001959050 |
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| Protein GI | 189499580 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0245] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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| TIGRFAM ID | [TIGR00151] 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.049824 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0288477 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCGCATAG GAACAGGCAT TGACGTACAT CAGTTCGCCG AAGGAAGAAA GCTCATTGTA
GGCGGCGTCG AGATTCCTCA CAGCAAAGGG CTGAAAGGCC ACAGTGACGC GGATGTTCTG
CTGCACGCGA TCAGCGATGC CCTGCTGGGC GCCGCCGCAC TCGGGGACAT CGGCAAACAC
TTCCCTGACA CCAGCCCGCA GTTCAAGGAT ATTGACAGCA TGATCCTCCT GCAACATGTC
GGCAAGCTGA TTGCTGAAGA AGGGTATGCC ATCGGGAACA TTGATTCCGT GCTGGTCATG
GAAAAGCCGA AAGTCGCACC GCATATTATG GCAATGCGCG GTAATATAGC CGCCTGTCTC
GACATCGATG TAAGCAAGGT CGCGGTCAAG GCCACGACAA CTGAAAAACT CGGCTATGTC
GGCCGCGAAG AAGGCGTCGC GGCACACGCC ATATGCCTGA TTGAAGAGAG GAAGCAGTGA
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| Protein sequence | MRIGTGIDVH QFAEGRKLIV GGVEIPHSKG LKGHSDADVL LHAISDALLG AAALGDIGKH
FPDTSPQFKD IDSMILLQHV GKLIAEEGYA IGNIDSVLVM EKPKVAPHIM AMRGNIAACL
DIDVSKVAVK ATTTEKLGYV GREEGVAAHA ICLIEERKQ
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