Gene Cphamn1_0582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0582 
Symbol 
ID6374246 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp610806 
End bp611798 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content45% 
IMG OID642683095 
Productintegrase family protein 
Protein accessionYP_001959022 
Protein GI189499552 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.132855 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGAAA TTCAAGGCCC ATCAGAAACA CTGTCTGAGT ATTACGCTCT CGGCGAGTTT 
GTGGAATATA TGAGAGCTCA AAGAAAATAT TCAGAACATA CCTGTAAGGC GTATAGTAAG
GACATTACCC AGTTTTATGA GTTTCTTTCT CTTCAGCATG GAGGAGAAAA GGCGGCTGAT
CCCGGGTTGG TCACACGTAT CGATATGCGG CTTTTTCTGG GTTTTCTTCT CAAGAAAGGC
TTGCAGCCTA AGTCTATTGC CAGGAAGCTG GCATCGGTAA AAAGTTTCTA CAACTATCTC
CTTGAAACCG GCCGCATAAA AGTCTCCGTT CCCGCTCAGG TTGTCACACC ACGTTTCAGC
AAAACCGTGC CGGGTTTTCT GAACGAAGAA CAGACGGAAA CTCTTTTTGA CCACATTCTT
GCCGCTCCAC AGCACCTTTC CGGATCGAGC AAAAATACCC GGTATGAAGA CGAGTTTACG
TATTCGCGTG ACAGGGCTAT TCTTGAGCTG CTCTATGGGT GTGGACTGCG TATATCGGAG
GTCGTTCATC TTGAGCGTGA ACAGGTCAAT ATCGAGCAGG GTTTCATGAA AATAAACGGC
AAGGGGAATA AGCAGCGCGT TCTGCCCCTT GGATCATATG CGGTTGAGGC ACTGAAAAAT
TATTTTGAAG TCAAACGAAA CTTCTTTAGA ATGAAAAAAG GAGAGGTTTC AGCTGCTGCA
TATGTCTTTG TAACAAAAAA AGGTATTGGT ATTTATCCGG TTCTTGTTCA ACGGCTTACC
AAGAAATATC TGTCCGCCGT CACGGAACTT AAATATAAAA ATCCGCATGC TCTGCGTCAT
AGTTTTGCAA CACATATGCT CAATAACGGT GCCGATCTGA AAAGTGTGAG CGAGATGCTG
GGTCACGCCA ATCTGACCAC GACGGAAATA TACACACATG TCACTTTCGG TAGGGTCAGG
GAAGTCTATG ATAAAGCTCA TCCCAGGGCA TGA
 
Protein sequence
MKEIQGPSET LSEYYALGEF VEYMRAQRKY SEHTCKAYSK DITQFYEFLS LQHGGEKAAD 
PGLVTRIDMR LFLGFLLKKG LQPKSIARKL ASVKSFYNYL LETGRIKVSV PAQVVTPRFS
KTVPGFLNEE QTETLFDHIL AAPQHLSGSS KNTRYEDEFT YSRDRAILEL LYGCGLRISE
VVHLEREQVN IEQGFMKING KGNKQRVLPL GSYAVEALKN YFEVKRNFFR MKKGEVSAAA
YVFVTKKGIG IYPVLVQRLT KKYLSAVTEL KYKNPHALRH SFATHMLNNG ADLKSVSEML
GHANLTTTEI YTHVTFGRVR EVYDKAHPRA