Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0582 |
Symbol | |
ID | 6374246 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 610806 |
End bp | 611798 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642683095 |
Product | integrase family protein |
Protein accession | YP_001959022 |
Protein GI | 189499552 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.132855 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGAAA TTCAAGGCCC ATCAGAAACA CTGTCTGAGT ATTACGCTCT CGGCGAGTTT GTGGAATATA TGAGAGCTCA AAGAAAATAT TCAGAACATA CCTGTAAGGC GTATAGTAAG GACATTACCC AGTTTTATGA GTTTCTTTCT CTTCAGCATG GAGGAGAAAA GGCGGCTGAT CCCGGGTTGG TCACACGTAT CGATATGCGG CTTTTTCTGG GTTTTCTTCT CAAGAAAGGC TTGCAGCCTA AGTCTATTGC CAGGAAGCTG GCATCGGTAA AAAGTTTCTA CAACTATCTC CTTGAAACCG GCCGCATAAA AGTCTCCGTT CCCGCTCAGG TTGTCACACC ACGTTTCAGC AAAACCGTGC CGGGTTTTCT GAACGAAGAA CAGACGGAAA CTCTTTTTGA CCACATTCTT GCCGCTCCAC AGCACCTTTC CGGATCGAGC AAAAATACCC GGTATGAAGA CGAGTTTACG TATTCGCGTG ACAGGGCTAT TCTTGAGCTG CTCTATGGGT GTGGACTGCG TATATCGGAG GTCGTTCATC TTGAGCGTGA ACAGGTCAAT ATCGAGCAGG GTTTCATGAA AATAAACGGC AAGGGGAATA AGCAGCGCGT TCTGCCCCTT GGATCATATG CGGTTGAGGC ACTGAAAAAT TATTTTGAAG TCAAACGAAA CTTCTTTAGA ATGAAAAAAG GAGAGGTTTC AGCTGCTGCA TATGTCTTTG TAACAAAAAA AGGTATTGGT ATTTATCCGG TTCTTGTTCA ACGGCTTACC AAGAAATATC TGTCCGCCGT CACGGAACTT AAATATAAAA ATCCGCATGC TCTGCGTCAT AGTTTTGCAA CACATATGCT CAATAACGGT GCCGATCTGA AAAGTGTGAG CGAGATGCTG GGTCACGCCA ATCTGACCAC GACGGAAATA TACACACATG TCACTTTCGG TAGGGTCAGG GAAGTCTATG ATAAAGCTCA TCCCAGGGCA TGA
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Protein sequence | MKEIQGPSET LSEYYALGEF VEYMRAQRKY SEHTCKAYSK DITQFYEFLS LQHGGEKAAD PGLVTRIDMR LFLGFLLKKG LQPKSIARKL ASVKSFYNYL LETGRIKVSV PAQVVTPRFS KTVPGFLNEE QTETLFDHIL AAPQHLSGSS KNTRYEDEFT YSRDRAILEL LYGCGLRISE VVHLEREQVN IEQGFMKING KGNKQRVLPL GSYAVEALKN YFEVKRNFFR MKKGEVSAAA YVFVTKKGIG IYPVLVQRLT KKYLSAVTEL KYKNPHALRH SFATHMLNNG ADLKSVSEML GHANLTTTEI YTHVTFGRVR EVYDKAHPRA
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