Gene Cphamn1_0577 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0577 
Symbol 
ID6374241 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp604880 
End bp607648 
Gene Length2769 bp 
Protein Length922 aa 
Translation table11 
GC content52% 
IMG OID642683090 
ProductPhosphoenolpyruvate carboxylase 
Protein accessionYP_001959017 
Protein GI189499547 
COG category[C] Energy production and conversion 
COG ID[COG2352] Phosphoenolpyruvate carboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.222337 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCACCT CTGCAACAAG TGTCGTCGAT TACGATAAAG CCTTAGTCGA TTTCCGGTTT 
TTACTGGACT GTTTTCGGAA AGTACTTCAG GAATTCGGAG AAACAGAACT TGCAGCGCAC
CTTCCCTGGG ACGAAGCATC AGTTCCGATA AGTCTCATCC CAAACAGAGG CAGAGCTGTA
CAGGCTTATA CCATAGTATT CCAGCTTCTC AACATGGCTG AAGAAAACTC AGGGGCCCAG
TTCCGCAGAA CCCTTGAAGC GACGAAAGAG CCTTCATCTC TTTCCGGACT ATGGGGAGAC
GCGTTCAGCC ACCTTAAAAA AATCGGGATT TCAGAGTCGC GCATCGTAGA AGAACTTTCA
CACATCTCGG TAGAACCCGT ACTGACCGCG CATCCTACAG AAGCAAAACG ACGCACGGTA
CTCGAACAGC ACCGTGAACT CTACCTGCTT CTCGTGAAAC TTGAGAACCA GATGTGGACT
CCTGCAGAAC GGGAGGATAT TCGAACAGAG ATCACAGTCG TGCTTGAACG ACTGTGGCGA
ACAGGAGAAA TATTTTTTGA GAAACCAACC GTTGACGCAG AACGGCAGAA CGTCATCCAT
TACCTCTACA ACATCTTCCC TTCCGTTCTT TCCATGCTTG ACAAAAGGCT CATCCAGGCC
TGGACTGACG CAGGATTCGA CAGAGCATCG ATCGAAGATC CGAAAAACTT TCCCAAGCTC
AGTTTCGGGA GTTGGGTAGG AGGAGACAGG GACGGTCACC CTTTCGTCAC CCCTGAGGTA
ACACAAGAGA CGTTGATGGA GATGCGACAG TATTCGCTCA GACTGGTGCA GAACCACTTG
CGTGAACTCG CCTCCAAACT CAGCCTTTCC GAGCGGTTTC AGTCTCCAAC ACCCGCCATT
TCAGAGCGAA TCACCCGACT CAGGGAGCTG ACCGACACAA GGGGAGATAA CGCGATATCA
AGAAATCCCA AAGAACCCTG GCGTCAGTTT ATCAATCTGA TGATAGCGGC TCTGCCTCCC
GAACCCGTCC TTCATGAGTT TCACGATGAA GAGCACTATC CGGATAGATA CCGCCACCAT
GACGAACTGC TTTCAGATCT CGACATTCTG AGAGACTCTC TCCTGACGAT AGGAGCGGAA
AACATTGCGA AAAACGATGT AAACCCTGTT TACCGGATTG TGCAGACCTT CGGATTCCAT
CTCGGCAAAC TGGATATACG GCAGAACAGC CGTATTCACG ATCTTGCGAT GTCACAGCTG
ATGCGTGCGG CCGGATTTAA AAACTGCGAT TTTCCGGACT GGAACGAAAA AGAGCGCATG
GCTTTTCTGA ACAGTGAACT CCTCTCTCCC CGCCCGTTCA CCCATCCAGA CATGGAGGTC
GGTCCGGAAG CGGAAACACT TCTCCGATGC TACCGTGCTT TGGGAAAACA TCTTAAACAA
TTCGGTCCTC ACGGTATCGG CTCCCTTATC GTCAGCATGA CCCGAAACGT TTCCGATCTG
CTTGCCATCT ATCTTTTTGC ACGGGAAGTC GGCCTGATGA CCACACATGA CGGCGGCGAC
GCATGCATGA TCCCCGTGGT TCCCCTGTTC GAAACCATTG ACGATCTCAC AAAAAGCCCG
GAAATTCTGC GGGAATTTCT CGATAATCCA CTCACCAGAA GGAGCATCGC CTATCATCGG
CAGATCCGGA ACGGGACAAG ACCGTCCCAG CAGGTCATGG TTGGCTACAG CGACAGCAAC
AAGGACGGCG GGATCACTTC CAGCCTCTGG AACCTGTACA GGGCGGAAGA AAAAATGCTT
GAAGTCGGCA GAGAACAGGA TATTGATATT CTTTTCTTTC ACGGACGCGG AGGAAGCATC
AGCCGGGGAG CAGGACCGAC TCACCGCTTC ATCAGGGCCC AACCCCACTG CTCGCTCGAA
ACCGGCCTCA GGGTCACCGA ACAGGGAGAA ACCATCTCCC AGAAATACGC GAACAAGATC
AACGCGACCT ATAACCTTGA GCTGTTCATG GCCGGCGTGA CCGAGGCCCG GCTCGCTCAT
CGGGTCAATC CAAAAAGCAA AATGTCGATC GAGCCTGTCA TGGATCTCCT CGCCGTTGAA
AGCAACAGAG CTTACCGGAG TTTGATCGAA TCGGAAGGAT TGCTTGAGTT TTTCCATCAG
GCGACCCCGA TAGACATTAT TGAATCGAGC AGGATCGGTT CCCGTCCTTC ACGAAGAAGC
GGAAAAGAAA GCCTCGATGA CCTGCGCGCA ATACCCTGGG TATTCAGCTG GAACCAGGCC
CGGTTCGCCA TTTCCGGATG GTACGGATTC GGAAGCGCCC TCGAACACCT CAGGAAAACA
CAGCCGGAAG CGTTCGATCT CATCAGGGAA AAGGATTTTT CATGGCCGCC GCTGCGCTAC
ATTGCAAGCA ATGTCTCGAC AAGTATCGCG ACTGTTGACC CTGAAATCAT GCAGAAATAT
GCCATGCTGG TCGAAAACCC TGATACCCGT CATAGAAATC TCACGATGAT TACCGCCGAG
TACCGGAGAA CACGGGAGCT TCTGGACATA TTCTACGGTG GTTCACTTCA GGACAAATTC
TTTAACGTGT TCCGCTTCAT CACTATGCGT CAGGAAGGAC TGAGCGAACT GCACCATTTG
CAGATCGATC TCCTGAGAAC CTGGAGAAAA CATAAATTAT CTGGAAAAGA GGACACAGCC
GATGCCATGC TCCCTGAGCT GCTGCTCACC GTCAACGCCA TAGCGAGCGG ACTGCGGTCC
ACGGGATGA
 
Protein sequence
MITSATSVVD YDKALVDFRF LLDCFRKVLQ EFGETELAAH LPWDEASVPI SLIPNRGRAV 
QAYTIVFQLL NMAEENSGAQ FRRTLEATKE PSSLSGLWGD AFSHLKKIGI SESRIVEELS
HISVEPVLTA HPTEAKRRTV LEQHRELYLL LVKLENQMWT PAEREDIRTE ITVVLERLWR
TGEIFFEKPT VDAERQNVIH YLYNIFPSVL SMLDKRLIQA WTDAGFDRAS IEDPKNFPKL
SFGSWVGGDR DGHPFVTPEV TQETLMEMRQ YSLRLVQNHL RELASKLSLS ERFQSPTPAI
SERITRLREL TDTRGDNAIS RNPKEPWRQF INLMIAALPP EPVLHEFHDE EHYPDRYRHH
DELLSDLDIL RDSLLTIGAE NIAKNDVNPV YRIVQTFGFH LGKLDIRQNS RIHDLAMSQL
MRAAGFKNCD FPDWNEKERM AFLNSELLSP RPFTHPDMEV GPEAETLLRC YRALGKHLKQ
FGPHGIGSLI VSMTRNVSDL LAIYLFAREV GLMTTHDGGD ACMIPVVPLF ETIDDLTKSP
EILREFLDNP LTRRSIAYHR QIRNGTRPSQ QVMVGYSDSN KDGGITSSLW NLYRAEEKML
EVGREQDIDI LFFHGRGGSI SRGAGPTHRF IRAQPHCSLE TGLRVTEQGE TISQKYANKI
NATYNLELFM AGVTEARLAH RVNPKSKMSI EPVMDLLAVE SNRAYRSLIE SEGLLEFFHQ
ATPIDIIESS RIGSRPSRRS GKESLDDLRA IPWVFSWNQA RFAISGWYGF GSALEHLRKT
QPEAFDLIRE KDFSWPPLRY IASNVSTSIA TVDPEIMQKY AMLVENPDTR HRNLTMITAE
YRRTRELLDI FYGGSLQDKF FNVFRFITMR QEGLSELHHL QIDLLRTWRK HKLSGKEDTA
DAMLPELLLT VNAIASGLRS TG