| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0552 |
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| Symbol | |
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| ID | 6374216 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 584935 |
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| End bp | 587139 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642683068 |
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| Product | polynucleotide phosphorylase/polyadenylase |
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| Protein accession | YP_001958995 |
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| Protein GI | 189499525 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.368343 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.96834 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTATAA GAAAAGAGAT CGATCTGGGA GACGGGAAAG TAATCACTAT TGAAACCGGC
AAGATGGCAA AGCAGGCGGA CGGAGCCACA ATCGTGCGTA TGGGTGACAC CATGGTCATT
GCTACTGTAG TATCAAGCAG AACTCCACCC TCTCCAAATC AGGATTTTTT CCCGATGCAG
GTTGAGTATC GTGAAAAGTA TTACGCTGCA GGAAAGTTCC CGGGCGGATT CATCAAACGC
GAAAGCAGGC CCTCGGAAAA AGAGATTCTT TCCGCACGCC TTATCGACAG AGCCCTCCGT
CCTCTCTTCC CCAACGGCTA CTATCAGGAT ACACAGATAA TCATTTCGGT TATTTCGTCC
GATCAGCTCA ACGATGCTGA CGTGCTGGGC GGAATCGCTG CATCAGCCGC GATCATGGTT
TCCGACATCC CGTTCGCAAA TTCGATGTCC GAGGTGAGGG TCGGAAGAAT TAACGGCGAG
TTTGTCATCA ACCCGACCAT CAATGAACTT GCGCAAAGCG ACATCGATAT CAGTATCGGG
GGAACAAACG ATACGATATG CATGCTCGAG GGTGAAATGA ATGAAATATC CGAAGCTGAA
ATGCTCGAAG CGATCAGATT CGGCCATGAA GCAATTAAAA AAATCTGCTC TTTACAGGAC
GATATCGCTG CCGAGGTGAA CAAACCCAAA CGCTCTTTTC TCGCAATTGA CGCTCCCGAT
GAGCTGAAAG AAAGCATTAA AGAAGCGTGT GAGGCTCCCC TGAAAGAGCT GGCCTACATG
CCGCTTGCAA AAGAAGAACG TGCGGAAAAA ACCACGGCTG TTTACAAGTC CATCACTGAA
CAGATTCTTG GCCGATATAA AAACGAGATA ACTGCAGAAG ATATCGCGGC CGATCCTTCA
AAGGCCCTCT ACCTTAATGA ACAGATCATT TCAGGTCACA TACACGCGAT TGAAAAACAG
GTGATGCGAC ACATGATTCT CGATGACGCC AAACGCCTTG ACGGGAGGAA ACTCGAAGAG
GTAAGGCCTA TCAGCATAGA GCTCGGCCTG ATTCCGAGAG CACACGGCTC GGCACTTTTC
ACCAGAGGAG AAACACAGGC ACTCGTCGTA CTGACACTCG GTACGAAAAA AGATGCCCAG
ATGATCGACA CGCTGCTCGA CGATACTGAA AAACGATTCA TGCTGCACTA CAATTTCCCT
CCCTTTTCGG TAGGAGAAAC CGGCAGAGTC GGAGGTGTGG GCCGCAGGGA AATCGGACAC
GGCAATCTTG CAGAAAGAGC CGTTAAAAAA GTAGTTCCGT CCGAGTCTGA ATTCCCGTAT
ACGATACGTC TCGTCTCTGA AATCCTTGAA TCCAACGGCT CATCATCCAT GGCCTCGGTC
TGCGGAGCAA CGCTTGCGGC AATGGATGGA GGCGTACCGC TTACCAAGCC GGTGTCAGGA
ATCGCCATGG GCCTTATCAA GGAAGACGAC AACTATGCAG TTCTTTCGGA TATACTCGGC
AACGAGGATC ATCTTGGCGA CATGGACTTC AAGGTTGCCG GAACGCGGGA TGGGATAACA
GCCTGTCAGA TGGATATCAA GATCGACGGT CTTGATTATC ATATTCTTGA AAAGGCTCTC
GAGCAGTCAA AAAACGGACG TCTGCATATA CTTGATAAAA TGACCGAATC CATCGCCGAC
CCAAGAGGTG AAATCGGACA ATACGCTCCA AAGCTCTCAA CCATTCAGGT TCCCGTGGAC
GCTATCGGTA TGATTATCGG AAAAGGCGGT GAAACCATCA GAAGCATTAC GGAAGAAACC
GGAGCTCAGA TCAACGTCGA CGATGACGGC ACGGTCACCA TCTCATCACC AAACGGCGAA
AGCGCTGCTG CTGCGATTGA AACGATCAAG ACGCTCATAT CCAAACCGGA AGTCGGCACG
ATATACATGG GTAAGGTGAA GGACATCCGT GAGGACCTGG GAGCGTTTGT TGAAATTCTG
CCAAGAACGG ACGGTCTGGT ACATATTTCT GAAATCGCCA GGGAAAGGGT GAACAAGGTA
AGCGATCACC TGAAACAGGG TGACCGGGTA AAGGTAAAGC TGATCGACAT CCGTAAAGAC
CAGAGATCAG GCAAGATCCG ATACGCGCTG TCCATAAAAG CATTGCTTGA CATGCCGGCT
GAATCTGCAA ACGGCCCGTC GGCACAGGAG GAACAAAACC AGTAA
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| Protein sequence | MFIRKEIDLG DGKVITIETG KMAKQADGAT IVRMGDTMVI ATVVSSRTPP SPNQDFFPMQ
VEYREKYYAA GKFPGGFIKR ESRPSEKEIL SARLIDRALR PLFPNGYYQD TQIIISVISS
DQLNDADVLG GIAASAAIMV SDIPFANSMS EVRVGRINGE FVINPTINEL AQSDIDISIG
GTNDTICMLE GEMNEISEAE MLEAIRFGHE AIKKICSLQD DIAAEVNKPK RSFLAIDAPD
ELKESIKEAC EAPLKELAYM PLAKEERAEK TTAVYKSITE QILGRYKNEI TAEDIAADPS
KALYLNEQII SGHIHAIEKQ VMRHMILDDA KRLDGRKLEE VRPISIELGL IPRAHGSALF
TRGETQALVV LTLGTKKDAQ MIDTLLDDTE KRFMLHYNFP PFSVGETGRV GGVGRREIGH
GNLAERAVKK VVPSESEFPY TIRLVSEILE SNGSSSMASV CGATLAAMDG GVPLTKPVSG
IAMGLIKEDD NYAVLSDILG NEDHLGDMDF KVAGTRDGIT ACQMDIKIDG LDYHILEKAL
EQSKNGRLHI LDKMTESIAD PRGEIGQYAP KLSTIQVPVD AIGMIIGKGG ETIRSITEET
GAQINVDDDG TVTISSPNGE SAAAAIETIK TLISKPEVGT IYMGKVKDIR EDLGAFVEIL
PRTDGLVHIS EIARERVNKV SDHLKQGDRV KVKLIDIRKD QRSGKIRYAL SIKALLDMPA
ESANGPSAQE EQNQ
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