Gene Cphamn1_0550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0550 
Symbol 
ID6374214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp579880 
End bp581871 
Gene Length1992 bp 
Protein Length663 aa 
Translation table11 
GC content51% 
IMG OID642683066 
Productacetyl-CoA synthetase 
Protein accessionYP_001958993 
Protein GI189499523 
COG category[I] Lipid transport and metabolism 
COG ID[COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases 
TIGRFAM ID[TIGR02188] acetate--CoA ligase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.572337 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGG AAAGAAAACC ATCCAAACAA CAACCAGCCG ATCAAGACTC AATCAGTTCT 
GTTCTTACGG AAAAGAGAAA GTTTCCTCCT CCCCCTGAAT TTTCGGAAAA CGCCCGCATT
TCATCAATGG ACGAGTATGA AAAACTCTAC GCTAAAGCCC AGAAAGATCC GGAAAAATAC
TGGGGCGGCA TAGCCGAAGA GTTTCACTGG GAAAAGAAAT GGAACAGTGT TCTTGACTGG
AAACCGCCTT ATGCGAAATG GTTTTCCGGC GGCACGACAA ACCTCTGTTA TAATGCCGTT
GACAGGCATG TAAAGAGCTG GAGAAAAAAC AAGGCCGCCA TAATCTGGGA AGGTGAAGAA
GGCGAACAGC GTGTTCTGAC CTACGGTGAA CTGCACCGTC AGGTAAGCAA ATTCGCCAAT
GTCCTGAAAA TCGCCGGCGT TCAACCGGGA GACAGGGTAG CCATCTACAT GGGCATGGTC
CCGGAACTGG CTATCGCAGT CCTTGCATGT GCTCGCGTCG GAGCTGTCCA TAATGTGATT
TTCGCAGGGT TTTCAGCTCA TGCCATCACC GAAAGGGTCA ATGACTCGAG AGCAAAGCTC
ATAATCTGCT CTGACGGAAC AAGAAGGCGC GGCAAAACCA TCAACCTCAA GGATATTGTC
GATGAAGCCA TTGTCAACAC CCCTTCCGTA CGCAGCGTCA TCGTGCTGAA AACCACCAAT
GAAGAGGTAC ACATGCATGA CGGCATGGAT CACTGGTGGC ATGATCTTAT GGGGCTCGCT
GTAGACCACA ATGATCCTGA GTTTGTCGAT GCGGAACATC CCCTCTTCAT TCTCTATACA
AGCGGATCAA CAGGCAAACC GAAAGGAATC CTCCATACGA CCGGAGGCTA CATGGTTCAT
GCGGCAAACT CCTTCAAACA TGTTTTCGAC ATCAAGGATG AAGACATTTA CTGGTGTACC
GCAGATGTCG GCTGGATCAC CGGACACACC TATCTGGTTT ACGGCCCGTT GCTTAACGGC
GCAACCATCA TGATGTACGA AGGTGCTCCC AACTACCCGC AATGGGATCG TTTCTGGGAT
ATCATCAACC GTCACAAAGT CACCATTCTC TACACCGCAC CCACAGCAAT CCGCGCATTT
ATCCGCGCAG GCGACGAATG GGTCACCAAA CATGATCTCA GCTCATTGAG GCTGCTCGGA
ACCGTCGGAG AACCGATCAA CCCCAAAGCA TGGATGTGGT ACCATACCGT TATCGGCAAG
GAAAAATGTC CGATTGTCGA TACCTGGTGG CAGACAGAAA CCGGCGGCAT ACTGGTTTCT
CCGCTTCCCG GAGCAACGCC GACCAAACCC GGCACGGCTA CAAGACCGCT TCCGGGAATC
ATGGTGGATG TCCTGCGCAA GGATGGCAAG CCCTGCAAAC CGAACGAAGG GGGCTACCTG
GTCATCAAGC AGCCCTGGCC ATCAATGCTT CGCACCATCT ACGGCGACAA CAAGCGTTAT
GAAGACACCT ACTGGTCCGA GTTCAAGGAC ATATACTTTA CTGGTGACGG CGCCCGAAAA
GATGAAGACG GTTATATATG GATCATGGGC CGTGTCGATG ACGTCGTCAA TGTTTCCGGT
CACCGTCTCG GCACAAGTGA AGTTGAAAGC GCCCTTGTCG CGCACGAGGC GGTTGCAGAA
GCGGCGGTGG TCAGCCGTCC TGATGAAATC AAGGGTAACT CCCTTATCGC GTTTGTCACG
CTCAAGGACG AATACGTCGG CGATATGAAA CTGCGTGATG ATCTCCGTGG ACATGTAGCT
AAAGAGATCG GCCCTATCGC CAAACCTGAT GAAATCAGAT GGGCTCAAGG TCTTCCCAAA
ACAAGAAGCG GGAAAATCAT GCGACGCCTG CTTCGTGAAC TTGCTTCCAC AAAGGAAATC
AAGGGAGATG TCACTACCCT CGAGGACTTT GGAGTACTGG AACAGCTTCG CGGAAAGGAA
GACGAAGAGT AG
 
Protein sequence
MAKERKPSKQ QPADQDSISS VLTEKRKFPP PPEFSENARI SSMDEYEKLY AKAQKDPEKY 
WGGIAEEFHW EKKWNSVLDW KPPYAKWFSG GTTNLCYNAV DRHVKSWRKN KAAIIWEGEE
GEQRVLTYGE LHRQVSKFAN VLKIAGVQPG DRVAIYMGMV PELAIAVLAC ARVGAVHNVI
FAGFSAHAIT ERVNDSRAKL IICSDGTRRR GKTINLKDIV DEAIVNTPSV RSVIVLKTTN
EEVHMHDGMD HWWHDLMGLA VDHNDPEFVD AEHPLFILYT SGSTGKPKGI LHTTGGYMVH
AANSFKHVFD IKDEDIYWCT ADVGWITGHT YLVYGPLLNG ATIMMYEGAP NYPQWDRFWD
IINRHKVTIL YTAPTAIRAF IRAGDEWVTK HDLSSLRLLG TVGEPINPKA WMWYHTVIGK
EKCPIVDTWW QTETGGILVS PLPGATPTKP GTATRPLPGI MVDVLRKDGK PCKPNEGGYL
VIKQPWPSML RTIYGDNKRY EDTYWSEFKD IYFTGDGARK DEDGYIWIMG RVDDVVNVSG
HRLGTSEVES ALVAHEAVAE AAVVSRPDEI KGNSLIAFVT LKDEYVGDMK LRDDLRGHVA
KEIGPIAKPD EIRWAQGLPK TRSGKIMRRL LRELASTKEI KGDVTTLEDF GVLEQLRGKE
DEE