Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0550 |
Symbol | |
ID | 6374214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 579880 |
End bp | 581871 |
Gene Length | 1992 bp |
Protein Length | 663 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642683066 |
Product | acetyl-CoA synthetase |
Protein accession | YP_001958993 |
Protein GI | 189499523 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
TIGRFAM ID | [TIGR02188] acetate--CoA ligase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.572337 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCAAGG AAAGAAAACC ATCCAAACAA CAACCAGCCG ATCAAGACTC AATCAGTTCT GTTCTTACGG AAAAGAGAAA GTTTCCTCCT CCCCCTGAAT TTTCGGAAAA CGCCCGCATT TCATCAATGG ACGAGTATGA AAAACTCTAC GCTAAAGCCC AGAAAGATCC GGAAAAATAC TGGGGCGGCA TAGCCGAAGA GTTTCACTGG GAAAAGAAAT GGAACAGTGT TCTTGACTGG AAACCGCCTT ATGCGAAATG GTTTTCCGGC GGCACGACAA ACCTCTGTTA TAATGCCGTT GACAGGCATG TAAAGAGCTG GAGAAAAAAC AAGGCCGCCA TAATCTGGGA AGGTGAAGAA GGCGAACAGC GTGTTCTGAC CTACGGTGAA CTGCACCGTC AGGTAAGCAA ATTCGCCAAT GTCCTGAAAA TCGCCGGCGT TCAACCGGGA GACAGGGTAG CCATCTACAT GGGCATGGTC CCGGAACTGG CTATCGCAGT CCTTGCATGT GCTCGCGTCG GAGCTGTCCA TAATGTGATT TTCGCAGGGT TTTCAGCTCA TGCCATCACC GAAAGGGTCA ATGACTCGAG AGCAAAGCTC ATAATCTGCT CTGACGGAAC AAGAAGGCGC GGCAAAACCA TCAACCTCAA GGATATTGTC GATGAAGCCA TTGTCAACAC CCCTTCCGTA CGCAGCGTCA TCGTGCTGAA AACCACCAAT GAAGAGGTAC ACATGCATGA CGGCATGGAT CACTGGTGGC ATGATCTTAT GGGGCTCGCT GTAGACCACA ATGATCCTGA GTTTGTCGAT GCGGAACATC CCCTCTTCAT TCTCTATACA AGCGGATCAA CAGGCAAACC GAAAGGAATC CTCCATACGA CCGGAGGCTA CATGGTTCAT GCGGCAAACT CCTTCAAACA TGTTTTCGAC ATCAAGGATG AAGACATTTA CTGGTGTACC GCAGATGTCG GCTGGATCAC CGGACACACC TATCTGGTTT ACGGCCCGTT GCTTAACGGC GCAACCATCA TGATGTACGA AGGTGCTCCC AACTACCCGC AATGGGATCG TTTCTGGGAT ATCATCAACC GTCACAAAGT CACCATTCTC TACACCGCAC CCACAGCAAT CCGCGCATTT ATCCGCGCAG GCGACGAATG GGTCACCAAA CATGATCTCA GCTCATTGAG GCTGCTCGGA ACCGTCGGAG AACCGATCAA CCCCAAAGCA TGGATGTGGT ACCATACCGT TATCGGCAAG GAAAAATGTC CGATTGTCGA TACCTGGTGG CAGACAGAAA CCGGCGGCAT ACTGGTTTCT CCGCTTCCCG GAGCAACGCC GACCAAACCC GGCACGGCTA CAAGACCGCT TCCGGGAATC ATGGTGGATG TCCTGCGCAA GGATGGCAAG CCCTGCAAAC CGAACGAAGG GGGCTACCTG GTCATCAAGC AGCCCTGGCC ATCAATGCTT CGCACCATCT ACGGCGACAA CAAGCGTTAT GAAGACACCT ACTGGTCCGA GTTCAAGGAC ATATACTTTA CTGGTGACGG CGCCCGAAAA GATGAAGACG GTTATATATG GATCATGGGC CGTGTCGATG ACGTCGTCAA TGTTTCCGGT CACCGTCTCG GCACAAGTGA AGTTGAAAGC GCCCTTGTCG CGCACGAGGC GGTTGCAGAA GCGGCGGTGG TCAGCCGTCC TGATGAAATC AAGGGTAACT CCCTTATCGC GTTTGTCACG CTCAAGGACG AATACGTCGG CGATATGAAA CTGCGTGATG ATCTCCGTGG ACATGTAGCT AAAGAGATCG GCCCTATCGC CAAACCTGAT GAAATCAGAT GGGCTCAAGG TCTTCCCAAA ACAAGAAGCG GGAAAATCAT GCGACGCCTG CTTCGTGAAC TTGCTTCCAC AAAGGAAATC AAGGGAGATG TCACTACCCT CGAGGACTTT GGAGTACTGG AACAGCTTCG CGGAAAGGAA GACGAAGAGT AG
|
Protein sequence | MAKERKPSKQ QPADQDSISS VLTEKRKFPP PPEFSENARI SSMDEYEKLY AKAQKDPEKY WGGIAEEFHW EKKWNSVLDW KPPYAKWFSG GTTNLCYNAV DRHVKSWRKN KAAIIWEGEE GEQRVLTYGE LHRQVSKFAN VLKIAGVQPG DRVAIYMGMV PELAIAVLAC ARVGAVHNVI FAGFSAHAIT ERVNDSRAKL IICSDGTRRR GKTINLKDIV DEAIVNTPSV RSVIVLKTTN EEVHMHDGMD HWWHDLMGLA VDHNDPEFVD AEHPLFILYT SGSTGKPKGI LHTTGGYMVH AANSFKHVFD IKDEDIYWCT ADVGWITGHT YLVYGPLLNG ATIMMYEGAP NYPQWDRFWD IINRHKVTIL YTAPTAIRAF IRAGDEWVTK HDLSSLRLLG TVGEPINPKA WMWYHTVIGK EKCPIVDTWW QTETGGILVS PLPGATPTKP GTATRPLPGI MVDVLRKDGK PCKPNEGGYL VIKQPWPSML RTIYGDNKRY EDTYWSEFKD IYFTGDGARK DEDGYIWIMG RVDDVVNVSG HRLGTSEVES ALVAHEAVAE AAVVSRPDEI KGNSLIAFVT LKDEYVGDMK LRDDLRGHVA KEIGPIAKPD EIRWAQGLPK TRSGKIMRRL LRELASTKEI KGDVTTLEDF GVLEQLRGKE DEE
|
| |