| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0540 |
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| Symbol | |
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| ID | 6374204 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 568792 |
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| End bp | 571602 |
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| Gene Length | 2811 bp |
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| Protein Length | 936 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 642683057 |
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| Product | DNA polymerase I |
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| Protein accession | YP_001958984 |
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| Protein GI | 189499514 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0258] 5'-3' exonuclease (including N-terminal domain of PolI)
[COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.560108 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGTCGT TGCATAAGAG CGATCAGAGT CAACTGTCTT TTGAGATGAG CACGACAGCG
ATCACAGAAA AACCGCAAGG AAGCAAAAAA CCCTCCCTTT TTCTGCTTGA CGGCATGGCG
CTGGTCTACC GGTCATTTTT CGCCCTCCAG CGCGCAGGAA TGTCAACAAA AGACGGAATT
CCGACAGGCG CCGCTTACGG ATTTCTCATG ACCCTGCTGA AAATATTTGA AACCGGTAAG
CCTGAATATC TTGCTGTTGC TTTTGACAGT AAGGAAAAAA CATTCCGGCA TGAGCTCTAT
GCTCCATACA AGGCGAACCG TCCGGAACCG CCGGAAGACC TTATTGCGCA ACTGGAGCTG
ATTTTCAAGC TTGTCGAAGC GTTCCGGATC CCGATTCTCA AGCAACCCGG TTATGAAGCC
GACGATCTTA TAGGAAGTGC CGTCAGGCAG TTCGAGAAAC AGTGCGAGAT AGTTATCGTC
ACACCGGACA AGGATCTCGC GCAACTTGTC AATGAAGGGG TTTCGATCCT TAAACCGGGC
AGAAACAGGA ACGAACTTGA TACCATGGGC TGTGATGAGG TCAAAAAACA GTTTGGTGTG
CCGCCTGAAT GTTTTATCGA TTTTCTGACC CTGACCGGGG ACAGTTCGGA CAACATACCC
GGCGCGAAAG GAATCGGACC GAAAACCGCC TCAAAGTTGC TCACGACCTA TGGTACTCTG
GAAAATGTCC TTGCCCATAT CGAGGAACTT GCCCCCAGGT CACGTAAAAG TCTTGAAGAG
TTCGAGACAA ACCGTAAGCT TATCCAGGCT CTTGTTACGA TAAGGACAGA TATCGAACTT
GACACTACCC TGCCTGAGCT TGCATCCGGA GAGCCTGACA GCGTAAAACT GTTCGGTCTG
CTGGAAAAAC TTGAAATGAA CAGCGTCGCG GAAAAGATAC CGCACATCTT TCCAGGATCA
ACTCCTCCCC GAACAGGCCT TCAGGAACAA AGCGAGCCTT CATTCTCTCC CCCGGAAGGA
GCCGCGTATC ATCTCATTGA TACCGAAGCC GCTCTCACAG AACTCACGAA TACACTTGAG
AAACAGAGCT CGTTTTCCAT AGATACTGAA ACCACCAGCC TGAACACTTT TGAAGCCGAA
CTTGTCGGCA TTTCGATCTG CTGGAAACCG GGCGAAGCGT ATTTCATTCA CTTTACGGAT
AAAGAGCTCA GCGCAAAGAC TTTTCCCGGA AAACTGCAGG ATGTACTTGA AAATCCTGAC
ATCAAAAAAA CAGGACAGAA TCTCAAGTAC GACATTCTCG TACTGAAAAA TCACCATGTA
CGGCTCGCGC CGGTCGGGTT CGATACCATG CTTGCAAGCT ATGTCATCAA TCCCGAGGAG
AAGCACAACC TTGACGATCT TGCAAAAAAA CATCTCAATC ACCGGACAAT CACCTACAGT
GAACTTACCG GTACAGGGAA AAAAGCGATC CCGATCCGTG AGGTTCCGAT CGATAGACTT
ACTGTCTATG CCTGCCAGGA TGCGGATGTC GCTTTGCAGC TCGAACAGAA ACAGAAAATA
CTGCTCGGAG AAAACAGCGA GCTTGAACAA CTCTGCGTGA ACATAGAGTT CCCGCTTGTC
GAAGTGCTTG CCGACATGGA GTACCTGGGA ATCGCTCTCG ATACAGCTCA GCTGGAAAGA
ACGGCTGAAA CCGTTAACCG TCAACTGCTG GAACTTACTG AGAGAATTTA TGATACCGCC
GGAACCATCT TTAACATCGA TTCCCCCAAA CAGCTTGGAA ACGTGCTTTT CAATGTCCTT
GGACTACCTG CAAAAAAAAC AACAAAAACC GGTTTCTCGA CCAATGTCCA GGTCCTTGAA
GATCTCTCTC TTATCCATCC GGTGGCAAAA GATCTTCTGG AATATCGCAG CCTCCAGAAA
CTCAAGACAA CCTATATTGA CGCCCTGCCG AAAATACTCA ATCCGAAAAC AGGGCGGGTT
CACACCTCCT TTAACCAGCA CATAACAGCG ACAGGCAGAC TTTCCTCATC AAACCCGAAC
TTGCAGAACA TCCCGATTCG CACTCCTCTT GGCAGAGAGA TCCGAAAAGC GTTTATCCCC
TCGACGAGTG ACAGGTACCT TCTTTCCGCC GATTACTCCC AGATCGAACT CCGTATCGCG
GCGGAAATCT CACAGGACAG TCATCTCATA GACGCATTCA GAAACCGGGA AGATATTCAC
ACCGCGACCG CGAAAACCAT CTTCGATACG GACGATATCA CCAAGGATAT GAGACGAAAA
GCCAAGGAGG TTAACTTCGG TGTTCTCTAC GGTATCCAGC CATATGGACT GGCTCAAAGG
CTGAACATAT CCCAAAAAGA GGCGAAAGCA ATCATTGACA CCTATATTTC AAAGTATCCG
GGCCTGTTCA GTGCCCTGCA GACGACCATC ACAGAAGCTG CAGAAAAAGG ATATGTCACG
ACGCTGACAG GACGCAGACG TTACATAGAG AATCTTCGCA GCAGAAACCG GAACATCAGG
ATGGCAGCGG AACGAGCGGC CATGAACACC CCTATCCAGG GAACTGCGGC AGATATCATC
AAGTGCGCTA TGGGCCTTGT TTCTGAAGCA ATAAAAAAGA AACGGATGCA ATCCGCAATG
CTCCTGCAGG TTCACGATGA ACTTGTTTTC GAAACGACAG AAGAGGAAAA AGCCGCTCTC
GCCGAAATCG CCGAGGGTTG CATGCAAAAA GCGGCAGAAC TCTGCGGACT TGAAACCGTT
CCTGTAGAAG TCGAAATCGG TACAGGAAAA AACTGGCTGG AAGCCCACTG A
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| Protein sequence | MVSLHKSDQS QLSFEMSTTA ITEKPQGSKK PSLFLLDGMA LVYRSFFALQ RAGMSTKDGI
PTGAAYGFLM TLLKIFETGK PEYLAVAFDS KEKTFRHELY APYKANRPEP PEDLIAQLEL
IFKLVEAFRI PILKQPGYEA DDLIGSAVRQ FEKQCEIVIV TPDKDLAQLV NEGVSILKPG
RNRNELDTMG CDEVKKQFGV PPECFIDFLT LTGDSSDNIP GAKGIGPKTA SKLLTTYGTL
ENVLAHIEEL APRSRKSLEE FETNRKLIQA LVTIRTDIEL DTTLPELASG EPDSVKLFGL
LEKLEMNSVA EKIPHIFPGS TPPRTGLQEQ SEPSFSPPEG AAYHLIDTEA ALTELTNTLE
KQSSFSIDTE TTSLNTFEAE LVGISICWKP GEAYFIHFTD KELSAKTFPG KLQDVLENPD
IKKTGQNLKY DILVLKNHHV RLAPVGFDTM LASYVINPEE KHNLDDLAKK HLNHRTITYS
ELTGTGKKAI PIREVPIDRL TVYACQDADV ALQLEQKQKI LLGENSELEQ LCVNIEFPLV
EVLADMEYLG IALDTAQLER TAETVNRQLL ELTERIYDTA GTIFNIDSPK QLGNVLFNVL
GLPAKKTTKT GFSTNVQVLE DLSLIHPVAK DLLEYRSLQK LKTTYIDALP KILNPKTGRV
HTSFNQHITA TGRLSSSNPN LQNIPIRTPL GREIRKAFIP STSDRYLLSA DYSQIELRIA
AEISQDSHLI DAFRNREDIH TATAKTIFDT DDITKDMRRK AKEVNFGVLY GIQPYGLAQR
LNISQKEAKA IIDTYISKYP GLFSALQTTI TEAAEKGYVT TLTGRRRYIE NLRSRNRNIR
MAAERAAMNT PIQGTAADII KCAMGLVSEA IKKKRMQSAM LLQVHDELVF ETTEEEKAAL
AEIAEGCMQK AAELCGLETV PVEVEIGTGK NWLEAH
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