Gene Cphamn1_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0539 
Symbol 
ID6374203 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp567776 
End bp568702 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content46% 
IMG OID642683056 
ProductPeptidase M23 
Protein accessionYP_001958983 
Protein GI189499513 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTCCA GGAAAGGCGT TTACTACCTT ACAGAAGATG GCAGATTCAA GCCACTGCAC 
TCCCTGAAGA TCATTCTTAC AGGTTGTATC GTCGCCATTC TTGTCGCATC GGCTGCGATA
CTTGTATCAA GCACCCTGAA TCCGGCAAAG TCACCGGAAC AGTCATCCCA CCGCAATTCC
CTGCTTACAC TGCAGAAAAA GATCAATACG CTTGAAAAGC AACTTGCATC ACTCTCTGCT
TCAGACAATC AATTGCGACT CGCAGTAAAC CTGCCTGTGG TCTCTCAAGA GGAAAAAAAC
ATGGGAACAG GAGGACAGCG CAGCCGTACT CTTTATGCGG ATCAGGAGTC ATCTGCTCAC
CTCCTTGCGA TGACCGGGAA GAAAATTGAA AACCTGAGCC TCAAAGTCGA GCAGCAAAAG
AAGAGTCATA AAGACATTCA GGCAACCTGG AATAAAAATC AGGCTCTTTT CGCTGCGGTA
CCCGCGTTGA AACCTATCGA CGGAAAGATA ACAAGCACCT TTGGCAAACG TCGCCACCCT
ATTTATAAAA GAGTGCTATT TCATGAGGGT ATTGATTTTT CCGCCAAAAC AGGAACAAAC
ATCTATGCAC CCGGTAACGG CATTGTCATC TTTACAGGAT ATAATTTCGG GTACGGTAAA
AAAATCGTCA TCGATCACGG CTTCGGCTAT AAAACCGTCT ACGCCCATCT TTCCCGTTCA
CTTGTCCATA AAGGACAGAA AGTAACCAGA GGCGACGTTA TCGCTCTGTC AGGCAATACC
GGAATTTCCA CAGGCCCCCA CCTGCATTAT GAGGTGCACA AATACAACAG AAAAGTCAAC
CCTTCCGCAT ACTTTTTTGA TGATTTCACA CCTGAAAGTT ATTTGACAGG CGCACCTGTT
TCGAAGCAAA GCGACAGCAA CTCGTAA
 
Protein sequence
MLSRKGVYYL TEDGRFKPLH SLKIILTGCI VAILVASAAI LVSSTLNPAK SPEQSSHRNS 
LLTLQKKINT LEKQLASLSA SDNQLRLAVN LPVVSQEEKN MGTGGQRSRT LYADQESSAH
LLAMTGKKIE NLSLKVEQQK KSHKDIQATW NKNQALFAAV PALKPIDGKI TSTFGKRRHP
IYKRVLFHEG IDFSAKTGTN IYAPGNGIVI FTGYNFGYGK KIVIDHGFGY KTVYAHLSRS
LVHKGQKVTR GDVIALSGNT GISTGPHLHY EVHKYNRKVN PSAYFFDDFT PESYLTGAPV
SKQSDSNS