Gene Cphamn1_0484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0484 
Symbol 
ID6374148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp505601 
End bp506257 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content53% 
IMG OID642683001 
ProductHAD-superfamily hydrolase, subfamily IA, variant 1 
Protein accessionYP_001958928 
Protein GI189499458 
COG category[R] General function prediction only 
COG ID[COG0546] Predicted phosphatases 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAA GTATGAAGTA CCGGTTGCTC GTTTTTGATT TTGACGGGAC GTTGGCCGAT 
AGTGAGGCAA GTATCATGCA CGTTCTTCAA CTTGTGGCGC GGGATCTGGG GCTTTCGGGG
GTTGACAGGC CACGTGCCCG GAAGAGTATC GGTCTGCCGT TGCGGCATAC GATTGCTATG
GGGCTTGGTC TTGAGCCTGA AGAGGCTTCC GGGGCGGTTG AACTCTACAG AAAGCACTAC
AACGAGGTTG CCTTCGGGTC GACACGACTT TTCCCGGGGG TGAAAGATAC CCTTGACCTT
CTACGGCAGG ATTTTCTGCT CGCTGTAGCG TCGAGCAAGA GCAGTCAAGG ACTGAAAAGT
ATGATGCAGC ACCTTGAGAT TATCGACCGT TTCGCTTTTA TTGCCGGGGC GCAGGATGTG
CAGCAGGGAA AGCCGGCACC GGATATGGTG CTGATTGCAT TGAAGGCCCT GGATGTTACG
GCGGAAAAGT GTCTGGTTGT GGGAGATACC GTTTATGATA TCGAGATGGG CCAGAGGGCA
TATGCAGATA CCTGTGCGGT TACCTATGGA AACAACTCGG CGGATGAGCT TCGCCGCCTC
GCTCCAACGT ATCTGATTGA TTCGTTTGAG CATGTCATAT CGTTGGCGCA TGCATGA
 
Protein sequence
MAKSMKYRLL VFDFDGTLAD SEASIMHVLQ LVARDLGLSG VDRPRARKSI GLPLRHTIAM 
GLGLEPEEAS GAVELYRKHY NEVAFGSTRL FPGVKDTLDL LRQDFLLAVA SSKSSQGLKS
MMQHLEIIDR FAFIAGAQDV QQGKPAPDMV LIALKALDVT AEKCLVVGDT VYDIEMGQRA
YADTCAVTYG NNSADELRRL APTYLIDSFE HVISLAHA