Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0484 |
Symbol | |
ID | 6374148 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 505601 |
End bp | 506257 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642683001 |
Product | HAD-superfamily hydrolase, subfamily IA, variant 1 |
Protein accession | YP_001958928 |
Protein GI | 189499458 |
COG category | [R] General function prediction only |
COG ID | [COG0546] Predicted phosphatases |
TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED [TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAAAAA GTATGAAGTA CCGGTTGCTC GTTTTTGATT TTGACGGGAC GTTGGCCGAT AGTGAGGCAA GTATCATGCA CGTTCTTCAA CTTGTGGCGC GGGATCTGGG GCTTTCGGGG GTTGACAGGC CACGTGCCCG GAAGAGTATC GGTCTGCCGT TGCGGCATAC GATTGCTATG GGGCTTGGTC TTGAGCCTGA AGAGGCTTCC GGGGCGGTTG AACTCTACAG AAAGCACTAC AACGAGGTTG CCTTCGGGTC GACACGACTT TTCCCGGGGG TGAAAGATAC CCTTGACCTT CTACGGCAGG ATTTTCTGCT CGCTGTAGCG TCGAGCAAGA GCAGTCAAGG ACTGAAAAGT ATGATGCAGC ACCTTGAGAT TATCGACCGT TTCGCTTTTA TTGCCGGGGC GCAGGATGTG CAGCAGGGAA AGCCGGCACC GGATATGGTG CTGATTGCAT TGAAGGCCCT GGATGTTACG GCGGAAAAGT GTCTGGTTGT GGGAGATACC GTTTATGATA TCGAGATGGG CCAGAGGGCA TATGCAGATA CCTGTGCGGT TACCTATGGA AACAACTCGG CGGATGAGCT TCGCCGCCTC GCTCCAACGT ATCTGATTGA TTCGTTTGAG CATGTCATAT CGTTGGCGCA TGCATGA
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Protein sequence | MAKSMKYRLL VFDFDGTLAD SEASIMHVLQ LVARDLGLSG VDRPRARKSI GLPLRHTIAM GLGLEPEEAS GAVELYRKHY NEVAFGSTRL FPGVKDTLDL LRQDFLLAVA SSKSSQGLKS MMQHLEIIDR FAFIAGAQDV QQGKPAPDMV LIALKALDVT AEKCLVVGDT VYDIEMGQRA YADTCAVTYG NNSADELRRL APTYLIDSFE HVISLAHA
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