| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0477 |
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| Symbol | |
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| ID | 6374141 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 500598 |
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| End bp | 501362 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642682995 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001958922 |
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| Protein GI | 189499452 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA AGAGCAGTAA CGCTCATGTA GAAACCCCGG GTGCAGCTGT CAGGATCAAC
AAGTACCTCG CGCTTTGCGG CATAGCATCG AGACGTGCCG CTGACCGGCT GGTTGAGTCC
GGAGAGGTTA TGGTAAACGG CCGCATCATG ATGAAGAAGG GAGCAACGGT TCGACCGGGG
GTCGATGAAG TTGTCGTTAG TAATCGGTTA CTTGCTTTGC CTGAAGAAAA AAAAGTGTAT
ATATTGCTCA ACAAGCCCAG GAATTACATT ACAACCAGCA GTGATGAGAA AGAGAGGGAA
ACGGTTCTTG ATCTGGTGGA TGTGAGGGAA CGTGTCTTTC CTGTAGGCCG TCTTGACAGG
AAAACAACCG GTATGCTTCT TCTGACCAAT GACGGTGCAT TGGCTCATCG GTTGATGCAC
CCATCATCGG AAGTTGAAAA GGAGTATCTG GCAGAGCTGG AAACCCCTTT TTCTGAAAAG
GATCTGCCGT CGTTGACTGG CGGGATGCGG CTGAAAGATA CGGGTGAAAA GACCAGTCCC
TGCAAGGGAA AAATTATGCA GGGAGGGTTA CGGGTTCTCG TGACCATTCA TGAGGGGAAA
AATCACCAGG TGAGAAGGAT GTTCCGTTCT TTGGGCTATG ATGTTAAGAG ACTTGACAGA
ACGGCATATG CCGGCTTGCG GGCAGGTAAG CTTCGCAGAG GCGAGTGGCG ATATGCCACA
TCGAAAGAGG TTGAGCAGCT CATGTTGACA AGCTCCGGCC TCTGA
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| Protein sequence | MKKKSSNAHV ETPGAAVRIN KYLALCGIAS RRAADRLVES GEVMVNGRIM MKKGATVRPG
VDEVVVSNRL LALPEEKKVY ILLNKPRNYI TTSSDEKERE TVLDLVDVRE RVFPVGRLDR
KTTGMLLLTN DGALAHRLMH PSSEVEKEYL AELETPFSEK DLPSLTGGMR LKDTGEKTSP
CKGKIMQGGL RVLVTIHEGK NHQVRRMFRS LGYDVKRLDR TAYAGLRAGK LRRGEWRYAT
SKEVEQLMLT SSGL
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