| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0447 |
|---|
| Symbol | |
|---|
| ID | 6374111 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 472173 |
|---|
| End bp | 473555 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642682965 |
|---|
| Product | Phosphoglucomutase |
|---|
| Protein accession | YP_001958892 |
|---|
| Protein GI | 189499422 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1109] Phosphomannomutase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000142951 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.775368 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGTCA AATTCGGCAC CGACGGGTGG CGAGCAATCA TTGCAGATGA GTATACGTTC
GACAATCTGA AACTTGCCTC GCTTGCTACC GCCGACTATT TTCTTGACCT TCCTGAGGCT
TTAAACGGTG TCTGCGTAGG ATACGATACC CGTTTCATGT CTCCGGAATT TGCCCGCTAC
ACCGCAGAAG TTCTCTCTTC ACGAGGCCTT CGCGTATTTC TTTCAGACAG CTTTGCACCC
ACACCGGCCG TATCACTCTT CAGCCGTGAC AAACAACTTG CGGGCGGCAT CGTTATCACC
GCGTCTCACA ATCCTCCACA CTATAACGGC TTTAAAATCA AGGCCTCTTA TGGAGGATCG
GCACTTCCGG AATCTATCTC CGTTATCGAG AAGAACCTGA ACGAAACAGA CCCCGGCACG
ACTATCGAGC CTGATGAAAG CCTGATTGAA ACGGCAGATA TCAAAGGCTA TTACCTGCAA
TACCTGCTGT CACATATCGA TCTCGATACC ATCAGAAAAT CCCACCTGCA TATCGCCCAC
AATGCCATGT TCGGGTCCGG ACAGCATATC ATGGATTCAA TCCTCGGCAC GACACAGGTA
GACTGTTACC ATTGCAGGCT CAATCCCGGT TTTGACGGCA TTAATCCCGA ACCGATACCC
CGATATATCA GGAACTTTAT GACCTTCTGC AAAAAAACAA AACCGGCAGC AGGCATCATA
AACGACGGCG ATGCCGACCG GATCTGCATG CTTGATGAAA ACGCGGACTA TATCGACTCA
CACAAGATAT TCGCCATTGT ACTCAAGTAT CTGGTTGAAG ACAAGCGAAA AACCGGAGAA
GTCGCCAAAA CATTTGCCCT GACCGACGTC ATTGACAAAA TATGCCGAAA ACACAACCTG
ACCCTTCATC TGCTTCCGGT AGGATTCAAA CACGTCAGCA AACTCATGAC GACAAGAGAC
ATACTCATCG GCGGAGAAGA ATCCGGAGGG ATTGGCATCA CATCATACCT TCCTGAAAGG
GACGGCATCT ATATCGGGCT CCTGATACTG GAAATCATGG CAAAGAAGAA AAAAACGCTG
TCCGGCCTTG TTCAGGAACT CTTTGACGAA TATGGCAGCT TTTATTATAA CAGGATCGAT
CTGCCTATAG ATGAAGAAAA AAAACAATCC TTGATCGCAA AAGCTTCCAG AGGGGATCTG
GAAAGAATAG CAACCTACCG TGTAACAGGG TTCAACGCTC TGGACGGTTT CAAGTATCAT
TTTGAAGGGG GATGGCTGTT GATACGACTA TCCGGTACGG AACCGGTACT GAGGCTTTAT
TGCGAGGCTG ATTCACCTGA AAAAGTTGAT GAGGCACTTG ACTACGCCAT GGCGCTTGGC
TGA
|
|---|
| Protein sequence | MQVKFGTDGW RAIIADEYTF DNLKLASLAT ADYFLDLPEA LNGVCVGYDT RFMSPEFARY
TAEVLSSRGL RVFLSDSFAP TPAVSLFSRD KQLAGGIVIT ASHNPPHYNG FKIKASYGGS
ALPESISVIE KNLNETDPGT TIEPDESLIE TADIKGYYLQ YLLSHIDLDT IRKSHLHIAH
NAMFGSGQHI MDSILGTTQV DCYHCRLNPG FDGINPEPIP RYIRNFMTFC KKTKPAAGII
NDGDADRICM LDENADYIDS HKIFAIVLKY LVEDKRKTGE VAKTFALTDV IDKICRKHNL
TLHLLPVGFK HVSKLMTTRD ILIGGEESGG IGITSYLPER DGIYIGLLIL EIMAKKKKTL
SGLVQELFDE YGSFYYNRID LPIDEEKKQS LIAKASRGDL ERIATYRVTG FNALDGFKYH
FEGGWLLIRL SGTEPVLRLY CEADSPEKVD EALDYAMALG
|
|---|
| |