Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0435 |
Symbol | |
ID | 6374099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 461162 |
End bp | 461992 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 642682953 |
Product | undecaprenyl diphosphate synthase |
Protein accession | YP_001958880 |
Protein GI | 189499410 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.064115 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.101114 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATTTTT CTGCAGCATT TACATCCCGC TGGTTCCACC CTGCAATTGA CCCTCAGGAC GAACAAACCC GAATTGAACT GAAAGCCGGT TGTTATCTTC CGGAGCATGT CGCTATCATT ATGGACGGTA ACGGAAGATG GGCAAGACAA AAAGGGAAAA CCCGCATCGA GGGGCATGCA GCCGGAGTGG AAGCGGTTCG TGACGTGGTT GAAGCCTGTG CTCAGCTGGG CATAGGGTAT CTTACGTTGT TTACTTTTTC AACCGAAAAC TGGAAACGGC CTGAAAAAGA GATCTCGTCA CTTATGCAGC TTCTTGTAAA AGTCCTGCAG AAAGAAGCTC GGGCGCTGTT CCGGAACAAG GTACGCATCC ATGTGATCGG GAACATCGAA CAACTACCGC AAAAAGTCAA ACAAACACTG AAAGACACTG TAGAACTCAC CAAAGACAAT ACAGGGCTTA CGCTTTGTAT TGCATTGAGT TACAGCGGGA AATGGGATAT TTTGCAGGCA TGCAGGGCCA TCAGCCGGGA AATAGCCGAA GGCCGGATTT CACCTGACAA GATTGATGAG CAGCTCATGG ATTCCTTTCT TTCAACCAGA GGTATTCCGG AACCTGAACT GCTCATAAGA ACAAGCGGAG AATTTCGAAT AAGTAACTTT CTTTTATGGC AAAGTGCCTA TTCGGAAATA TATTTCACCA ACACCTACTG GCCTGATTTC CGTAGAGGTC AGCTCTATGA CGCCATAAGG GATTTCCAGA AACGGGAACG TCGCTTCGGT CAGACAAGCG AACAACTTCA AGACAAAAAC GCTTTACAAA GCAGGTTATA A
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Protein sequence | MDFSAAFTSR WFHPAIDPQD EQTRIELKAG CYLPEHVAII MDGNGRWARQ KGKTRIEGHA AGVEAVRDVV EACAQLGIGY LTLFTFSTEN WKRPEKEISS LMQLLVKVLQ KEARALFRNK VRIHVIGNIE QLPQKVKQTL KDTVELTKDN TGLTLCIALS YSGKWDILQA CRAISREIAE GRISPDKIDE QLMDSFLSTR GIPEPELLIR TSGEFRISNF LLWQSAYSEI YFTNTYWPDF RRGQLYDAIR DFQKRERRFG QTSEQLQDKN ALQSRL
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