Gene Cphamn1_0435 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0435 
Symbol 
ID6374099 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp461162 
End bp461992 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content47% 
IMG OID642682953 
Productundecaprenyl diphosphate synthase 
Protein accessionYP_001958880 
Protein GI189499410 
COG category[I] Lipid transport and metabolism 
COG ID[COG0020] Undecaprenyl pyrophosphate synthase 
TIGRFAM ID[TIGR00055] undecaprenyl diphosphate synthase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.064115 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.101114 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTT CTGCAGCATT TACATCCCGC TGGTTCCACC CTGCAATTGA CCCTCAGGAC 
GAACAAACCC GAATTGAACT GAAAGCCGGT TGTTATCTTC CGGAGCATGT CGCTATCATT
ATGGACGGTA ACGGAAGATG GGCAAGACAA AAAGGGAAAA CCCGCATCGA GGGGCATGCA
GCCGGAGTGG AAGCGGTTCG TGACGTGGTT GAAGCCTGTG CTCAGCTGGG CATAGGGTAT
CTTACGTTGT TTACTTTTTC AACCGAAAAC TGGAAACGGC CTGAAAAAGA GATCTCGTCA
CTTATGCAGC TTCTTGTAAA AGTCCTGCAG AAAGAAGCTC GGGCGCTGTT CCGGAACAAG
GTACGCATCC ATGTGATCGG GAACATCGAA CAACTACCGC AAAAAGTCAA ACAAACACTG
AAAGACACTG TAGAACTCAC CAAAGACAAT ACAGGGCTTA CGCTTTGTAT TGCATTGAGT
TACAGCGGGA AATGGGATAT TTTGCAGGCA TGCAGGGCCA TCAGCCGGGA AATAGCCGAA
GGCCGGATTT CACCTGACAA GATTGATGAG CAGCTCATGG ATTCCTTTCT TTCAACCAGA
GGTATTCCGG AACCTGAACT GCTCATAAGA ACAAGCGGAG AATTTCGAAT AAGTAACTTT
CTTTTATGGC AAAGTGCCTA TTCGGAAATA TATTTCACCA ACACCTACTG GCCTGATTTC
CGTAGAGGTC AGCTCTATGA CGCCATAAGG GATTTCCAGA AACGGGAACG TCGCTTCGGT
CAGACAAGCG AACAACTTCA AGACAAAAAC GCTTTACAAA GCAGGTTATA A
 
Protein sequence
MDFSAAFTSR WFHPAIDPQD EQTRIELKAG CYLPEHVAII MDGNGRWARQ KGKTRIEGHA 
AGVEAVRDVV EACAQLGIGY LTLFTFSTEN WKRPEKEISS LMQLLVKVLQ KEARALFRNK
VRIHVIGNIE QLPQKVKQTL KDTVELTKDN TGLTLCIALS YSGKWDILQA CRAISREIAE
GRISPDKIDE QLMDSFLSTR GIPEPELLIR TSGEFRISNF LLWQSAYSEI YFTNTYWPDF
RRGQLYDAIR DFQKRERRFG QTSEQLQDKN ALQSRL