| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0433 |
|---|
| Symbol | |
|---|
| ID | 6374097 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 457850 |
|---|
| End bp | 458539 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642682951 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001958878 |
|---|
| Protein GI | 189499408 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3637] Opacity protein and related surface antigens |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.0000000321544 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.196957 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG TACTATCACT TCTTATGGTA TTTATGGTTA CGGTAGCTTT TACCGCTACT
GGATACAGCG CTGAAAAATA TGTCAGTGGT AATATCGGCA TCTCTTGGAT GAACGATAGT
GAAATAAATG ACATCATCGG TCTGACGGAG GCTTACGATG TCGATTTAGA TCTCGGCTTC
AGTTCCGGGC TTACTCTTCT CGGCGCATTC GGTTGCGATT ATGGCAGCTA CAGGCTTGAA
GGCGAACTTG GCTATCAGGG TAACGATGTA AAATCACTGG GCGTGACAAT TCCGGATTAT
TATGGCCAAA ACGAAGATCT TAGTGAAAGC GTTGATCTTC AAGGTGACAT CACCGTCCTC
TCTCTTCTCG TAAACGGTTA CTATGATATC GATCTCGGCG GCGTTGAGCT TTCACCAACT
GTCGGTGTTG GTGTCGCACA GGTTTCGATA GATAATGTTA CTGGTGATAT GGAAGAAATA
AACGAAGTGG AAATGGACGA AATCGGCCTT GATATCAGTG AAACCACGTT TGCCTACCAG
GCAGGTATCG GCCTCGGTAT TCCTGTTGCC GACAACATCA TGCTCGATGC ACGGTACCGC
TACTTCGCAA CCACGGACTT CATGATGCTC TTAGTCAATA CAAATGTCAC GAGTCACAGT
GCTCTGCTTG GTCTGCGTGT TGGATTCTAA
|
|---|
| Protein sequence | MKKVLSLLMV FMVTVAFTAT GYSAEKYVSG NIGISWMNDS EINDIIGLTE AYDVDLDLGF
SSGLTLLGAF GCDYGSYRLE GELGYQGNDV KSLGVTIPDY YGQNEDLSES VDLQGDITVL
SLLVNGYYDI DLGGVELSPT VGVGVAQVSI DNVTGDMEEI NEVEMDEIGL DISETTFAYQ
AGIGLGIPVA DNIMLDARYR YFATTDFMML LVNTNVTSHS ALLGLRVGF
|
|---|
| |