| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0428 |
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| Symbol | |
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| ID | 6374092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 452473 |
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| End bp | 453636 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 642682946 |
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| Product | TRAP dicarboxylate transporter- DctP subunit |
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| Protein accession | YP_001958873 |
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| Protein GI | 189499403 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG4663] TRAP-type mannitol/chloroaromatic compound transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0280038 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0226901 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAATCC AAACGACACT GAACCGTATG CAAGACAATC CCAGAAGAAA ATTCCTGAAA
CGTTCGCTTC AGGCCTGCAC TGCATCGCTT GCACTGAGTG CCCCCATACT CAATGCAGGA
TGCAATAAAT CATCTTCGTC ACCTGCTGAC GGTGCACCTG CCGTTCACAC CGGCAAGCGT
TTTCAATGGA AAATGCTGAC AACATGGCCG CCAACGCTGC CCGTACTCCA GGATGGACCG
AAACTGTTCG CTCAATGGGT AAAGGAGATG TCGGAAGGGC GCCTCGATAT CCAGGTCTAT
GGAGGAGGAG AGCTGGTCCC GGCACTCGAA GCCTTTGGAG CCGTCAGCCA GGGAACAGCT
GAAATCGGCC ATGGAGCGTC GTACTACTGG GCGGGAAAAG TTCCTGCCGC TCAGTTTTTC
GCGGCTGTTC CTTTCGGGAT GAATCCACAG CAGATGAACG CCTGGATCAT CAGCGGGGGA
GGACTGAAAC TCTGGGAAGA AGTTTACGCA CCCTTCAATC TGATTCCTTT ATCCGGGGGC
AATACCGGAA TACAGATGGG CGGCTGGTTC AACAAGGAGA TCAATGCCGT CAGCGATCTG
AAAGGCCTTA AAATGAGGAT TCCCGGACTG GGAGGAAAAG TAATCTCCAA AGCCGGTGGA
TCCGCTATAC TGTCGTCCGG CAGTGAAATC TATACCAATC TGGAACGAGG CGTGATTGAT
GCAACCGAAT GGATCGGACC CTACCATGAC TATATGATGG GATTCTACAA AGTAGCCCGT
TATTACTACT ACCCCGGTTG GCACGAACCT GGTACGAACC TTGAGTTCTT TATCAACAAA
GGCGCTTTTT CACAACTACC CTCCGACCTG CAGCAGATTG TCCGTAACGC AGCTGCACGA
GTACATTACT GGATGCTTTG CGAGTTCGAA GCCCAGAACA ACCGTTACCT GCAGAAGCTT
GTCAATGAAG AAAACGTTGA TCTGAGAGCT TTCCCTTCAC AAGTGCTTGA GCAGTTACGC
ACCTATTCAG ATGAGGTTAT CAGAGAGATT GTCAGCAGCG ACGCTCAAAG CAAAAAGATT
TATGATGCAT ATACCTCTTT CCGCATGCAG ATAACGCCAT GGGCGGATAT TTCAGAGAAA
ATCTACTATG CGAATGCATT GTAA
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| Protein sequence | MIIQTTLNRM QDNPRRKFLK RSLQACTASL ALSAPILNAG CNKSSSSPAD GAPAVHTGKR
FQWKMLTTWP PTLPVLQDGP KLFAQWVKEM SEGRLDIQVY GGGELVPALE AFGAVSQGTA
EIGHGASYYW AGKVPAAQFF AAVPFGMNPQ QMNAWIISGG GLKLWEEVYA PFNLIPLSGG
NTGIQMGGWF NKEINAVSDL KGLKMRIPGL GGKVISKAGG SAILSSGSEI YTNLERGVID
ATEWIGPYHD YMMGFYKVAR YYYYPGWHEP GTNLEFFINK GAFSQLPSDL QQIVRNAAAR
VHYWMLCEFE AQNNRYLQKL VNEENVDLRA FPSQVLEQLR TYSDEVIREI VSSDAQSKKI
YDAYTSFRMQ ITPWADISEK IYYANAL
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