| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0419 |
|---|
| Symbol | |
|---|
| ID | 6374081 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | - |
|---|
| Start bp | 441823 |
|---|
| End bp | 443649 |
|---|
| Gene Length | 1827 bp |
|---|
| Protein Length | 608 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642682936 |
|---|
| Product | ABC transporter-related protein |
|---|
| Protein accession | YP_001958865 |
|---|
| Protein GI | 189499395 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0718918 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGCG GCAAAGAACA ATCAAAAGGG TTTACACCGC AGAAAGACGA CCTGCTTTCT
TCAGGGAAAA AAGGGCCGGC TGACCGTTAT ATCATCTTAC GCCTGCTGAG CTATGTCAAA
CCCTATAAAG GCCTGCTCGC TTCAGCCATA GCGATAACCC TTGCCGGATC GGTTCTGGGG
CCACTCAGGC CCTATATGAC CAAGCTGGCT ATCGACGATT ATATCGCAAA GGGAAACATC
AAAGGTCTTG CGCTGATCAG CCTCATCCTG CTTTTCATCA TACTCCTCGA CGGCTTAAAA
CAGTACGCCG CGACCTACCT CACACAGCTC CTCGGTCAGA AAGCGGTGCT GAATCTGAGA
ATGGATGTTT TCCGGCACCT GCAGAAACTT TCCGTTTCGT TTTACGACCG TAATCCGGCT
GGCCGGCTTA TCACCAGAGC GACCAACGAT GTTGAAGCGC TCAATGAAAT GCTCTCAAGC
GGTATCGTTA CAATTATCGG GGACATCATG CAGCTCCTGT TTATCGTTAT TCTCATGTTC
ATGATAGACA CGGAACTGAC ACTGATCGTT CTGAGCATTC TTCCGTTTAT GATCTATGCT
ACCATGTCTT TTAAAAGCAG GGTTCGCAAG GCTTTTCAGG ACGTCAGAGC TCACCTGGCG
AAGCTTAACT CCTTTTTTCA GGAGCATATA TCAGGCATGA GCATCGTTCA GCTGTTTGAC
AGGGGTGATA AAGAATATGA AAAACATGTC GCTATAAACA GAGAATACAG GGATGCAAAT
ATTAAAACGG TTTTTTATTT CTCGGTATAC TACCCGCTTA TTGAACTGCT CAGCTCGACA
GCGGCTGGTC TCGTCATCTG GTACAGCGGT CTGCGGATGC TTGAGGGGGA TCTTACACTC
GGCATCGTTG TCTCGTTCGT ACAGTACATC TGGCTGTTTT TCCGTCCCTT GCAACACCTG
TCCGACCGCT TCAATATTCT CCAGACCGCT CTTGCGAGTT CAGACAGAAT TTTCAGGCTT
CTGGATGAAA AAGATATCGT CAAGGAACCC GAAAACCCTG TAAATCCAGG TTCTTTCAGG
GATGAAATCG CATTCACCAA TGTCTGGTCG GCCTACAGCG CCGACAACTG GATACTCAAA
GACATCTCAT TCAGCGTCAA ACGAGGAGAA AAAATTGCGA TCGTAGGGGC AACGGGAAGC
GGTAAAACAA CCATCATCAA TCTCCTTTCA AAACTCTACA CCTATCAAAA AGGATCGGTA
ACGCTCGATG GAGCAGAACT GTCAAGGATT CCTGAACGGA CACTCCGAAA GATTGTCGGT
GTTGTCATGC AGGATGTCTT TCTTTTTTCC GGAACAATAA AAGAGAATCT TTCATTTGGA
AAGCCGGATG TATCCGATGA AGAGATATAC CATGCCGTCA AGACCGTTGG TGCCGAACGT
TTCATTGAAA AACTTCCGGA AGGCTATAAC TATCGGGTCA ATGAAAACGG TTCCGGCCTT
TCGGCAGGTC AGAAGCAGCT CATTGCTTTT GTCCGCGCTC TTCTTTACAA CCCTGAGATA
CTTGTCCTTG ACGAAGCCAC AAGTTCGGTC GACACAGAGA CTGAACAGCT CATTGAAACG
GCGACCGCGA ACCTCATGGA AAACCGTACA TCAATTATCA TCGCGCACCG CCTTTCGACC
GTGCAACATG CGGACAGAAT CATTGTCATG CACAAAGGCA CCATAAAGGA GAGCGGCTCC
CATCAGGAAC TTCTTGCCCA GAAAGGCCTC TACTACAAAC TGTATCTCCT GCAGCACCCG
GAGAAAATGC GCCTGCAGAC GGGGTAA
|
|---|
| Protein sequence | MSSGKEQSKG FTPQKDDLLS SGKKGPADRY IILRLLSYVK PYKGLLASAI AITLAGSVLG
PLRPYMTKLA IDDYIAKGNI KGLALISLIL LFIILLDGLK QYAATYLTQL LGQKAVLNLR
MDVFRHLQKL SVSFYDRNPA GRLITRATND VEALNEMLSS GIVTIIGDIM QLLFIVILMF
MIDTELTLIV LSILPFMIYA TMSFKSRVRK AFQDVRAHLA KLNSFFQEHI SGMSIVQLFD
RGDKEYEKHV AINREYRDAN IKTVFYFSVY YPLIELLSST AAGLVIWYSG LRMLEGDLTL
GIVVSFVQYI WLFFRPLQHL SDRFNILQTA LASSDRIFRL LDEKDIVKEP ENPVNPGSFR
DEIAFTNVWS AYSADNWILK DISFSVKRGE KIAIVGATGS GKTTIINLLS KLYTYQKGSV
TLDGAELSRI PERTLRKIVG VVMQDVFLFS GTIKENLSFG KPDVSDEEIY HAVKTVGAER
FIEKLPEGYN YRVNENGSGL SAGQKQLIAF VRALLYNPEI LVLDEATSSV DTETEQLIET
ATANLMENRT SIIIAHRLST VQHADRIIVM HKGTIKESGS HQELLAQKGL YYKLYLLQHP
EKMRLQTG
|
|---|
| |