| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0393 |
|---|
| Symbol | |
|---|
| ID | 6374055 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 418891 |
|---|
| End bp | 419829 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642682910 |
|---|
| Product | Abortive infection protein |
|---|
| Protein accession | YP_001958839 |
|---|
| Protein GI | 189499369 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1266] Predicted metal-dependent membrane protease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.00491577 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.74185 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAA TTAGTGGTGG CCGGACAAAG AAAAACCGGA TTTTTTTTCA TACCAGTGCA
GTACTTCTGG TCATTCTGGT TGCCTATCCT TTGTTCGGCG GCATGATGAT GTCATCTGTG
TTGCAGGTTA CTACGGATGG TACAGTGGAC CCGATATCAT GGAAGAGCAG GGAGACCTTG
TCAGTTGTCC GGGTAGTTCA GGCCATCGGT CAGATTGTAT TGATTGGCCT GCCGGTTCTT
TTTCTGACAG GTTTCATCAC CGGAGATAAA CGGCTTTTCT CAAAACATAA CTTCGCCTTT
CTCGGGATCG GGCACCGGGG TTCAATGCAG GGTGTTTTGC TTGCGATTAC AGGTGTTTTG
CTGCTGCAGC CTTTTGTATA TGCTCTCATG GAAGCTACAG GTTATCTCCT TCCGCATCTT
GGTGATTTTG GCAAGGCTCT CCTCGAAAAT CAAAAGCAGC TTGAGCACTA CCTGATTTTT
CTTGCCGGCG CGGATTCTGC GAGTGAGTTC CTGCTCGTCG TTCTTGTGAT TGCTGTGATT
CCGGCAATTT GTGAAGAGAT TTTTTTTCGG GGATATATTC AGAAAAACTA TGAGGAATCC
TTGAATCCGT TCAGAGGCAT AGCTCTTTCA GGTCTTGTTT TCGGGCTTTT CCATCTGAGC
CCGGCCAATC TTGTGCCGCT TACGGTCATG GGCTGGTACC TGGGATATGT GTACTATAAA
ACCCGGAATC TTCTTGTTCC GGTGCTGGTT CATTTCTGTA ACAATTTTTT GGCTCTGAGT
GTTTTGCAGT TTCAGCGAAG CGGTCAGGAT GGGGCCGGCC TGATTGAATC CCGGGATGTT
CCCGGCAGCT CACTTGTTCC TGTTGTTCTG ATTTCGCTTG CTTTGTTCGT GCTTGTACTC
CGAAGTTTCA ACAGTCGGTT TGCCGTAAAG AGGGCCTGA
|
|---|
| Protein sequence | MSEISGGRTK KNRIFFHTSA VLLVILVAYP LFGGMMMSSV LQVTTDGTVD PISWKSRETL
SVVRVVQAIG QIVLIGLPVL FLTGFITGDK RLFSKHNFAF LGIGHRGSMQ GVLLAITGVL
LLQPFVYALM EATGYLLPHL GDFGKALLEN QKQLEHYLIF LAGADSASEF LLVVLVIAVI
PAICEEIFFR GYIQKNYEES LNPFRGIALS GLVFGLFHLS PANLVPLTVM GWYLGYVYYK
TRNLLVPVLV HFCNNFLALS VLQFQRSGQD GAGLIESRDV PGSSLVPVVL ISLALFVLVL
RSFNSRFAVK RA
|
|---|
| |