| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0337 |
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| Symbol | |
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| ID | 6373997 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 343420 |
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| End bp | 347457 |
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| Gene Length | 4038 bp |
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| Protein Length | 1345 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642682856 |
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| Product | type I site-specific deoxyribonuclease, HsdR family |
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| Protein accession | YP_001958787 |
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| Protein GI | 189499317 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.038664 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.920027 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCACAC CCTCCGAACA TAAAACCGTC CAATCCCGTA TCCTCGCTTA TGCCGAGGAA
ATCGGCTGGG CCGTTGTGTC TCGTGAGGAG GCCGAAAAAA GGAGGGCGGG TTTTCCAACC
CGCCATTACA TTCAAAGTGG CAAGCAAGAA AATGGCGGAC AGGAATGTCC GCCCTCCGGT
AAAGAATCTT TATCTCTATT CTTCGACGAT CTTCTTGACG CGAAGGTGCG GGAGTTCAAT
CCTTGCTACG CGGAGGCTGA GGGCGCGTTG CTTGGGCAGT TCCGCCATCT TCATGCGGAC
ATCTATGGCA ACCGGGAATT TGTGGAGCAA TTGCGCAACC GGGGCAAGTT TTTCGACCAT
GAGGAGAAGC GCGAGCGCGA CCTGATTCTG ATCGATTACG ACGACCCGGC GAGGAACGTG
TACGAAGTCA CCGAAGAGTG GGCCTTTCAC AACGGGCACT ACGGCACGCG GGAAGATGTC
GTCTTTCTCA TCAACGGTAT CCCGGTGCTG GTGATCGAGT GCAAGAACGC CAGCAAGGAC
GAGGCGATTG CCCTCGGGAT AGACCAGATT CGTCGGTACC ACCGTGAAAC CCCCGAGCTG
TTCGTGCCGC AGCAGCTTTT TACCGCCACC GACGCCATCG GCTTTTCGTA CGGAGCCACT
TGGAACACCG TGCGCCGGAA CATATTCGAG TGGAAGATAC TGGGGGGCGG ACATTCCTGT
CCGCCATTAC ATTCAGAATT GGAAAGCGGA CATTCCTGTC CGCCATTACA TTCAGAATTG
GAAAGCGGAC TTTCCAGTCC GCCATTACAT TCCGACACGG CAATCGGACT TTCCAACCCG
CCATTACATT TAAAAGACGC TGAAGAGAAT GGCGGACAGG AATGTCCGCC CTCCTTTGAC
GTTGAAGAGA ATGGCGGGTT GGAAAACCCG CCCTCCTTTC TTGACCCGGA GAGAGAGATT
GGCATGACAC AGCATCGGTT GCCTCACTGG CAGCAGGGTG ATGTGTGGGT ATTCGTGACA
TGGCGGCTGG CGGATTCACT GCCACAGTCG AAACTGGAGG AGTGGAAAGA AGAGCGGGAG
ATCTGGCTTT CGAATCATCC CGAGCCATGG GATGAGAAAA CCGAAGAGGA GTATCATGAA
CGCTTTTCGC GTCAGATCGA CGAATGGCTC GATCAGGGCA GTGGTTCGTG TCTGTTGAGG
GAACCTGCTT ATGCTCAGAT CGTGGCGAAT GCGTTGCGGC ATTTTGACGG AGAACGCTAT
CAGCTGGCTT CGTTCGTGGT GATGCCTAAT CATGTGCATG TGTTGTTCTG TCCGTCCGGA
ACGCATTCGC TCGCCGGGAT TCTGAAATCC TGGAAGGGCT TCAGCGCGCG TGAGATCAAC
AAACGATCGG GAAAGACGGG ATCGTTCTGG CAGGAAGAGT ATTGGGACCG TTTGATTCGA
AGTGAGAAGC ACTTTTTCAG AGTAGCAAAG TACATTCGTG AGAATCCAAT AAAGGGGGGC
GGACTTTCCA GTCCGCCATT ACATTCTGAT TTTGAAAGAG GATTAGAAAA CCCGCCATTA
CATTCTGATG TGAATGTAGG ACTTTCCAAC CCGCCATTTT ATTACGAATG CGAATTGCTG
TTCGGAAAAA ATGGCGGACA GGAATGTCCG CCCTCCGTTC CCGGTCGTCT CGAATCGAAG
GTAAAAACCT TCTGCGCCAT CCCGCAGGTG CTCGCCTTCC TGAAGGAGTA CATTGTCTTT
GCCGAGAAGG ACGAGGAGCT GAACAAGTAC ATTCTGCGCC AGCACCAGAC CGGTGCGGTG
GATGCATCCG TCAATCGGGC ACTTGATCCT GTCCGTTCCC GTGGTCTCGT CTGGCATACG
CAGGGGAGCG GCAAGACTTT CACGATGATC AAGGCGGCTG AACGGCTCTT CCGTGCGCCA
GAGGCGGAAA AGCCGACCAT CCTTTTGATG ATCGACCGGA ACGAGCTGGA AGACCAGATG
CTCAAAAACC TCGCCGCTCT CGGTCTCGGC AACCTGGAGC ACGCGAGCAG CATTGCAAGG
CTGAACAAAC TGCTGAAGTA TGACTACCGG GGCATCATCG TCACGATGAT CCACAAATTC
CGGGATATGC CGGGGAATAT CAATACCCGG TCAAACATCT ACGTCCTGAT CGACGAAGCC
CATCGCACCA CCGGCGGCGA TCTCGGCAAC TACCTCATGG CCGGTTTGCC CAACGCCACC
TTTATCGGTT TCACCGGTAC GCCGGTGGAC AAGACCGTCT ACGGCAGGGG CACCTTCAAG
ACCTTCGGCT GCGAGGATGA CAAGGGGTAT CTGCACAAGT ATTCCATCGC TGACAGCATC
GAAGACGGCA CCACGCTGCC GCTCTACTAC CAGCTTGCCC CCAATGACAT GCTCGTCCCG
CACGAGACAC TGGACGCGGA GTTTCTCTCC CTCGCCGAAG CCGAGGGGGT CGCCGACATC
GAAGAGCTGA ACAAAATTCT CGACCGGGCC GTGAACCTGA AGAACTTTCT CAAAGGCAGG
GAGCGGATCG AGAAAGTCGC GCAGTTTGTT GCCGGGCATT ACCTCGCTAA CGTCGAACCG
CTCGGCTACA AGGCTTTCCT TGTCGGGGTA GACCGGGAGG CCTGCGCCCA CTACAAGCAG
GCCCTCGACC AGTTCCTTCC GTCCGATTAT TCCCGGGTGG TCTACACCGG CAACAACAAC
GACTCCGTTC TGCTCAAGAA ATTTCATCTC GACCAGAAGC AGGAACGTCA GATCCGCAAA
AGCTTCGGCA AGATCGACCA GCAGCCAAAA ATCCTCATCG TCACCGAGAA ACTCCTTACC
GGATTCGATG CGCCCCTGCT CTACGCCATG TATCTCGACA AGCCGATGCG CGACCATACC
CTGTTGCAGG CCATCGCAAG GGTAAACCGT CCCTACGAGA ACGAAGCGCA GGAGATGGTG
AAGCCCCACG GTTTCGTCCT TGATTTTGTC GGTATCTTCG ACAAGCTCGA AAAAGCCCTC
GCCTTCGACA GCAAGGAGAT TAACGCCATC GTCAAGGATA TCAAACTTCT GAAGATGCTT
TTTCAGAACA AGATGGAGGC TATAGGGGGG CGGACATTCC TGTCCGCCAT TGGAGTACAA
ACGGCTGATA TACGAAACGG GCATTGGATT TCGAATGAGG ATTCTGAATG TAATGGCGGA
CTGGAAAGTC ATGAGGATAA ATGTAATGGC GGACTGGAAA GTCCGCCCCC CTTTACGTTC
AACGACAGGG ATGTCGATAA TCTGATAGAG CATTTCCGAG ATCCGGAGCG GCGGAAAGCG
TTTTTCAAGG AGTACAAAGA GATCGAGATG CTCTACGAGA TCATCTCTCC GGACGCCTTT
CTCCGACCGT TTATCGAGAG GTATGCGACG CTTTCCGCCG TGTACGATGT GGTCCGCAAG
GCCTATGCGA AGCGTATACA GGTTGATCGT GATTTCCAGC GGAAGACCAA CCTGTTAGTT
CAGGAAAAGG TCGGCAGTTA CGGAGTTGGA GAGTTGCAGG GCGTGGTGAA AATAGATTCG
AACGCCATCG ACATCATTAA CGCTCAGGCC GGAGGTGCTC CAACGAGGGT GATCAATCTT
ATCAAGAGCA TTGAAAAGAT CGCAGATGAT CAAAGTGACG ATCTGTTCCT GATCGCCATG
GCAGAACGGG CGCAGGCTGT GCAGGAGAGT TTCGAGAGCC GTCAGGTGAC GACGGCCGAA
GCCCTGGAAC AGCTGATGCA AGCGGTCGAA GTGAACGAGG AGCGAAAAAA AGAGCAGGCC
GCAAAGGGGT TCGATGGACT GACCTTCTTT GTCTACCGGA CCTTGCTTGA TGAGAAGATC
GAACATGCCG AAGAGGTCAG CAGGCAGATC AAGACGGCGT TTGTGGAATT TCCCAACTGG
CAGAAGAGCG AAGCTGCGCT GCGTGAGCTT CGCAAAAAGA TTACCTTTGC GATCTTTGCT
CAATCAGACG ATCTCGAGCG AGTCACGGGT ATCGTGGACT ACCTGTTCCG CCTGCTGGAA
AGGGCTAACC GGATCTGA
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| Protein sequence | MPTPSEHKTV QSRILAYAEE IGWAVVSREE AEKRRAGFPT RHYIQSGKQE NGGQECPPSG
KESLSLFFDD LLDAKVREFN PCYAEAEGAL LGQFRHLHAD IYGNREFVEQ LRNRGKFFDH
EEKRERDLIL IDYDDPARNV YEVTEEWAFH NGHYGTREDV VFLINGIPVL VIECKNASKD
EAIALGIDQI RRYHRETPEL FVPQQLFTAT DAIGFSYGAT WNTVRRNIFE WKILGGGHSC
PPLHSELESG HSCPPLHSEL ESGLSSPPLH SDTAIGLSNP PLHLKDAEEN GGQECPPSFD
VEENGGLENP PSFLDPEREI GMTQHRLPHW QQGDVWVFVT WRLADSLPQS KLEEWKEERE
IWLSNHPEPW DEKTEEEYHE RFSRQIDEWL DQGSGSCLLR EPAYAQIVAN ALRHFDGERY
QLASFVVMPN HVHVLFCPSG THSLAGILKS WKGFSAREIN KRSGKTGSFW QEEYWDRLIR
SEKHFFRVAK YIRENPIKGG GLSSPPLHSD FERGLENPPL HSDVNVGLSN PPFYYECELL
FGKNGGQECP PSVPGRLESK VKTFCAIPQV LAFLKEYIVF AEKDEELNKY ILRQHQTGAV
DASVNRALDP VRSRGLVWHT QGSGKTFTMI KAAERLFRAP EAEKPTILLM IDRNELEDQM
LKNLAALGLG NLEHASSIAR LNKLLKYDYR GIIVTMIHKF RDMPGNINTR SNIYVLIDEA
HRTTGGDLGN YLMAGLPNAT FIGFTGTPVD KTVYGRGTFK TFGCEDDKGY LHKYSIADSI
EDGTTLPLYY QLAPNDMLVP HETLDAEFLS LAEAEGVADI EELNKILDRA VNLKNFLKGR
ERIEKVAQFV AGHYLANVEP LGYKAFLVGV DREACAHYKQ ALDQFLPSDY SRVVYTGNNN
DSVLLKKFHL DQKQERQIRK SFGKIDQQPK ILIVTEKLLT GFDAPLLYAM YLDKPMRDHT
LLQAIARVNR PYENEAQEMV KPHGFVLDFV GIFDKLEKAL AFDSKEINAI VKDIKLLKML
FQNKMEAIGG RTFLSAIGVQ TADIRNGHWI SNEDSECNGG LESHEDKCNG GLESPPPFTF
NDRDVDNLIE HFRDPERRKA FFKEYKEIEM LYEIISPDAF LRPFIERYAT LSAVYDVVRK
AYAKRIQVDR DFQRKTNLLV QEKVGSYGVG ELQGVVKIDS NAIDIINAQA GGAPTRVINL
IKSIEKIADD QSDDLFLIAM AERAQAVQES FESRQVTTAE ALEQLMQAVE VNEERKKEQA
AKGFDGLTFF VYRTLLDEKI EHAEEVSRQI KTAFVEFPNW QKSEAALREL RKKITFAIFA
QSDDLERVTG IVDYLFRLLE RANRI
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