| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0330 |
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| Symbol | alaS |
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| ID | 6373990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 332767 |
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| End bp | 335427 |
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| Gene Length | 2661 bp |
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| Protein Length | 886 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 642682849 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001958780 |
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| Protein GI | 189499310 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.43097 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.0181617 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTCCA GCGATATACG ACAGTCATTT CTCGATTATT TTGAAAAGAA AGAACACACG
ATCGTGCGTT CCGCGCCGGT GATTCCGGCA GAGGATCCTA CGCTGCTGTT CACCAACGCG
GGGATGAACC AGTTCAAGGA TGTCTTTCTT GACAAGGGTT CCAGGCCTTA CAGCAGAGCA
GCAGATACGC AGAAGTGTAT TCGCGCTTCA GGCAAGCATA ACGATCTGGA AGATGTCGGC
CGCGACACCT ATCACCACAC CTTTTTCGAG ATGCTCGGGA ACTGGTCTTT TGGTGACTAT
TACAAGAAAG AGGCGATCGC CTGGGCATGG GAACTCCTGA CGGAGGTATG GAGCCTTCCC
AAAGAGAGGC TCTACGCCAC TGTCTACCAG GATGACGACG AAAGCCTGGA GATCTGGAAA
ACAGCAACCG ATATCGATCC GGACCATATC ATGAAGTTCG GTGACAAGGA TAATTTCTGG
GAGATGGGGG AGACCGGTCC CTGCGGCCCC TGTTCCGAGA TCCATATCGA TCTGACCGAT
GACCTCTCCG GCAGGGAGCT GGTCAACGCT GACGATCACC GGGTTATCGA GTTGTGGAAC
CTTGTTTTTA TCCAGTACAA CCGGAAGGCA GACCGTTCTC TGGAGCCGCT GCCGAAAAAG
CATGTCGATA CCGGTATGGG GTTTGAAAGG ATTACCGCAG TGCTGCAGTC CAAAGGATCG
AATTACGATA CCGATATTTT CGCTCCGTTG TTTGATGCCA TCACCGCTCA TACAGGGGTA
GCCTATACCG CGACGCTTGA CGGAGAGCGG GACATGGCCA TGCGGGTTAT TGCCGATCAT
GCACGGACAC TGACCTTCGC CATAACCGAC GGGGCGGTTC CGGGAAACGA AGGCCGCGGC
TATGTGCTGC GCAGAATTCT GCGACGGGCG GTGCGCTATG CAAGAAAGCT CGACTGCAAT
CAGCCTGTGC TCTACAGGCT TGTGGGCGTT ATTGCCGATA CCATGGGTGC TGTTTTTCCC
GAACTGAAAA AGCAGCAGGC AACCGTCGAG AAAATCGTCA AATCGGAAGA AGAAAGTTTT
CTTGTCACGC TTGGCCGTGG GATAGAGATT TTCGGAGAGA TCGCGGCAGC CCTCAAGGCG
TCAAAAGAAA AAAGCATCAG CGGGGAGGAC GCGTTCCGGC TCTATGATAC CTATGGGTTT
CCGCTTGATC TGACCAGGCT CATGGCTTCC GAGGAAGGTT TGGGTGTCGA TGAAAAAGGC
TTCGGGGCCT GCATGAAGGA GCAGAAAGAG AGAGCCCGCA AAGACAGGAA ACAGAAGCAG
CAGATTACCG GTGATGAGGG CCAATGGCAG TGGTTTGAAC AGAAAGGCCC GACGGTTTTT
CTCGGTTACG AAACGCTTGA AACCGAAGCA CAGATTATCG GTGTCAGGAT CGCCGGTAGT
CAGATGCAGC TCGTGCTCGA CCAGACGCCT TTCTATGCGG AAAGCGGAGG GCAGACAGGT
GACAGAGGGC GCATCGAAGG AGAGAACTAT ATATTTGACG TTATCGATAC CCGGAAAGAC
GGCGATGTGA TTGTTCACGT CGCAGGCACA GTCTATGATC GTGCTACCGG CGGGGAGGTC
ACGCCGGAAA GTATTGCTTT CAGCCAGGCC GTTCAGGTTC AGGCACAAGT GGACAAAGAG
ACCAGAGAAG CCACGGAACG AAACCATACG GCAACCCATC TTCTGCATGC GGCCCTGAGA
AAGGTGCTTG GCGAGCATGT GCAGCAGAAA GGTTCATTGG TCGGCCCGGA CCGGCTGCGT
TTCGATTTCA GCCATTTCGA AAAAGTTTCT GCCGGTGAGC TTGAAGCGGT CGAGGCTGAA
GTCAATGAGC GTATCCGCGA GGCCGGGGCG CTGGTCAAAC ATGCTGACAT TCCCTATGAA
GCCGCGCTGG AAAAAGGCGC ACTCGCGTTT TTCGGCGACA AGTACGCTGA CAGGGTGAGG
GTCGTGGAGG TTCCGGGAGT GTCGATGGAG TTGTGCGGCG GAACCCATGT GAGCAATGTC
GGTCAGATAG GTCTGTTTAA AATTATGAGC GAATCCTCTA TCGCTTCAGG TATCCGCCGG
ATCGAGGCGA TGAGCGGAAA AGCTGCCGAG GAAGTTCTCT GGGGCGACTA TCAGGAACTG
CAGCAGGTTC GCCAGCTGCT CAGGACAGGA GGAGAAGAGA GTGTTGCCGC TCGTGTGCAG
GAGCTTCTTG AAGAGAGAAA AATTCTCGAC AAAAAGCTTC AGGATATGAA GCTCTCACTG
CTTCTGGACA AGGCGATCGG AGAGCTTGAA CAAGCTGATA CGGTTAACGG ATGCCGGATA
TTTGTGATGA AATACGACGA TTCCGGAGCG GATACGCTTC GCAGCCTCGG CCAGTTCTTG
CGTGAAAAAA TCGGACGTGG GGTCGGTCTG CTTGCCGGTG AAGAACAGGG GAAGGTGACC
CTGGTGGGGT TTGCCGGTGA CGAGGCTATC AGAGAATGCG GCCTGAATGC CGGAGAACTG
GTGAAAAAAG CTGCGGCAAT GGTGCAGGGC GGAGGCGGAG GAAAGCCCGG ATTTGCAACT
GCCGGGGGCA AAAACCCTGC GGGTATTCCT GAATCGATGA AGGTTTTCGA GGAAACGGTT
AGAACAAAGC TGCAATCATA A
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| Protein sequence | MKSSDIRQSF LDYFEKKEHT IVRSAPVIPA EDPTLLFTNA GMNQFKDVFL DKGSRPYSRA
ADTQKCIRAS GKHNDLEDVG RDTYHHTFFE MLGNWSFGDY YKKEAIAWAW ELLTEVWSLP
KERLYATVYQ DDDESLEIWK TATDIDPDHI MKFGDKDNFW EMGETGPCGP CSEIHIDLTD
DLSGRELVNA DDHRVIELWN LVFIQYNRKA DRSLEPLPKK HVDTGMGFER ITAVLQSKGS
NYDTDIFAPL FDAITAHTGV AYTATLDGER DMAMRVIADH ARTLTFAITD GAVPGNEGRG
YVLRRILRRA VRYARKLDCN QPVLYRLVGV IADTMGAVFP ELKKQQATVE KIVKSEEESF
LVTLGRGIEI FGEIAAALKA SKEKSISGED AFRLYDTYGF PLDLTRLMAS EEGLGVDEKG
FGACMKEQKE RARKDRKQKQ QITGDEGQWQ WFEQKGPTVF LGYETLETEA QIIGVRIAGS
QMQLVLDQTP FYAESGGQTG DRGRIEGENY IFDVIDTRKD GDVIVHVAGT VYDRATGGEV
TPESIAFSQA VQVQAQVDKE TREATERNHT ATHLLHAALR KVLGEHVQQK GSLVGPDRLR
FDFSHFEKVS AGELEAVEAE VNERIREAGA LVKHADIPYE AALEKGALAF FGDKYADRVR
VVEVPGVSME LCGGTHVSNV GQIGLFKIMS ESSIASGIRR IEAMSGKAAE EVLWGDYQEL
QQVRQLLRTG GEESVAARVQ ELLEERKILD KKLQDMKLSL LLDKAIGELE QADTVNGCRI
FVMKYDDSGA DTLRSLGQFL REKIGRGVGL LAGEEQGKVT LVGFAGDEAI RECGLNAGEL
VKKAAAMVQG GGGGKPGFAT AGGKNPAGIP ESMKVFEETV RTKLQS
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