Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0312 |
Symbol | |
ID | 6373968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 310730 |
End bp | 311515 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642682827 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001958762 |
Protein GI | 189499292 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000113464 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000120518 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCATACA CCTTGATAAC AGGCGCATCG AATGGAATCG GCAGGGAGTT TGCTCGTGAA TTTGCCCGCC GTAAAAGTGA TATGGTTCTT GTCGCCCGTT CGGAAAGTTC TTTGCGGAAT CTCAGTGCGG AACTCAGTCC CGCTGGTGAG CCTGTTATTC ACCTTTGCAT TGAGGACCTG AGCGATCCGG AAAGTCCACG GAGGGTCCAT CAATACTGTC GTGACAGATC TCTCGGAGTG GAGTTGATCA TAAACTGTGC AGGGTTTGGA TATGCCGGAG AGTATGATTC CATGCCTCTT GAAGCGTTAC AGGAAATGAT TCAGGTGAAC ACTGCCGCGA TGGCAGTACT TATTCGCCTG TTTCTGCCGG CCATGATAGC TGAAAAAAAA GGCGGAATAA TAAATGTGGC TTCAATCGGC GGGTTTCAGG GAATTTCCCG TCTCGGGCTG TATTCTGCAA CAAAGTCCTT CATCCTTACT CTGAGTGAGT CGTTGCACGA GGAGCTGAAA AACAAAGGGA TAAAGGTTGT CGCGGTCAGC CCCGGATACA TCGAAACCGG ATTTCATGCC AGGGCCCGTC AACATCCTGA ATGCAGTATT CTGCCGCTTT CAAGCCCGTC CGTTGTTGTC AAGGCGTCTA TTAAGGGGCT GATAAAAAAC AGGTTACATG TCTATCCCAC GATGACTGAT TTTATGGTGG TATTTTTTCA GCGATTTCTC CCGAGGTCGG CGGTGCTGAA GACAGCGGCG TTTCTGGCGC CTTTGAAGCA CAAAGGTGAA CGGTAG
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Protein sequence | MPYTLITGAS NGIGREFARE FARRKSDMVL VARSESSLRN LSAELSPAGE PVIHLCIEDL SDPESPRRVH QYCRDRSLGV ELIINCAGFG YAGEYDSMPL EALQEMIQVN TAAMAVLIRL FLPAMIAEKK GGIINVASIG GFQGISRLGL YSATKSFILT LSESLHEELK NKGIKVVAVS PGYIETGFHA RARQHPECSI LPLSSPSVVV KASIKGLIKN RLHVYPTMTD FMVVFFQRFL PRSAVLKTAA FLAPLKHKGE R
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