Gene Cphamn1_0312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0312 
Symbol 
ID6373968 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp310730 
End bp311515 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content50% 
IMG OID642682827 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_001958762 
Protein GI189499292 
COG category[R] General function prediction only 
COG ID[COG0300] Short-chain dehydrogenases of various substrate specificities 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000113464 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000120518 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCATACA CCTTGATAAC AGGCGCATCG AATGGAATCG GCAGGGAGTT TGCTCGTGAA 
TTTGCCCGCC GTAAAAGTGA TATGGTTCTT GTCGCCCGTT CGGAAAGTTC TTTGCGGAAT
CTCAGTGCGG AACTCAGTCC CGCTGGTGAG CCTGTTATTC ACCTTTGCAT TGAGGACCTG
AGCGATCCGG AAAGTCCACG GAGGGTCCAT CAATACTGTC GTGACAGATC TCTCGGAGTG
GAGTTGATCA TAAACTGTGC AGGGTTTGGA TATGCCGGAG AGTATGATTC CATGCCTCTT
GAAGCGTTAC AGGAAATGAT TCAGGTGAAC ACTGCCGCGA TGGCAGTACT TATTCGCCTG
TTTCTGCCGG CCATGATAGC TGAAAAAAAA GGCGGAATAA TAAATGTGGC TTCAATCGGC
GGGTTTCAGG GAATTTCCCG TCTCGGGCTG TATTCTGCAA CAAAGTCCTT CATCCTTACT
CTGAGTGAGT CGTTGCACGA GGAGCTGAAA AACAAAGGGA TAAAGGTTGT CGCGGTCAGC
CCCGGATACA TCGAAACCGG ATTTCATGCC AGGGCCCGTC AACATCCTGA ATGCAGTATT
CTGCCGCTTT CAAGCCCGTC CGTTGTTGTC AAGGCGTCTA TTAAGGGGCT GATAAAAAAC
AGGTTACATG TCTATCCCAC GATGACTGAT TTTATGGTGG TATTTTTTCA GCGATTTCTC
CCGAGGTCGG CGGTGCTGAA GACAGCGGCG TTTCTGGCGC CTTTGAAGCA CAAAGGTGAA
CGGTAG
 
Protein sequence
MPYTLITGAS NGIGREFARE FARRKSDMVL VARSESSLRN LSAELSPAGE PVIHLCIEDL 
SDPESPRRVH QYCRDRSLGV ELIINCAGFG YAGEYDSMPL EALQEMIQVN TAAMAVLIRL
FLPAMIAEKK GGIINVASIG GFQGISRLGL YSATKSFILT LSESLHEELK NKGIKVVAVS
PGYIETGFHA RARQHPECSI LPLSSPSVVV KASIKGLIKN RLHVYPTMTD FMVVFFQRFL
PRSAVLKTAA FLAPLKHKGE R