Gene Cphamn1_0282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0282 
Symbol 
ID6373937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp274022 
End bp274663 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content53% 
IMG OID642682796 
Productbeta-lactamase domain protein 
Protein accessionYP_001958732 
Protein GI189499262 
COG category[R] General function prediction only 
COG ID[COG0491] Zn-dependent hydrolases, including glyoxylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.396725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCTGA AACAGTTCCG AACCGGAGGT GACAGAAACT TCGGCTATCT CGTCGCTGAC 
GAAGAGAGCA GGGAGGCTTT TGTTGTCGAT CCGTCCAACA ACCCTGCCCT GATTGTCGAT
CATGCCCGGG AGAAGGGGTT CGGTATTCGT TATGTCTTTT GCACCCATGG TCATTCTGAC
CACACCAATG GAAACGAGGA GATAGCACGC CTTACCGGTC TCGTCCCTCT GCTTTTCGGG
TCGGTCTGTC CCGTCACCGC TATCAAAGTG CAGGACGGCG CGGTTTTTCC GCTCGGAAAT
CTTGAAGTAA AGGTCATTCA CACACCGGGC CACACGCCTG ATTCACTCTG CATCTATGCA
GGAGACGCAC TGTTTACCGG TGACACCCTT TTTGTGGGCA AGGTCGGCGG TACCGATCTG
GGAGCTCAGG CTGAAGAGGA ATTCCGCTCA CTGCATGAGA GCATTATGGT ACTGCCTGAT
AGTGTCAGGG TGTTCCCCGG TCACGATTAC GGTACGTCTC CGAACTCGAC CATCGGTGAC
GAAAAGAAAA CCAATCCCTT TCTTTTGCAG CCCGACATTG CGGCTTTCAT CCATCTGAAA
AAAAACTGGG CGGCCTACAA GAAAGAACAC GGGATAGCGT AA
 
Protein sequence
MYLKQFRTGG DRNFGYLVAD EESREAFVVD PSNNPALIVD HAREKGFGIR YVFCTHGHSD 
HTNGNEEIAR LTGLVPLLFG SVCPVTAIKV QDGAVFPLGN LEVKVIHTPG HTPDSLCIYA
GDALFTGDTL FVGKVGGTDL GAQAEEEFRS LHESIMVLPD SVRVFPGHDY GTSPNSTIGD
EKKTNPFLLQ PDIAAFIHLK KNWAAYKKEH GIA