Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0282 |
Symbol | |
ID | 6373937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 274022 |
End bp | 274663 |
Gene Length | 642 bp |
Protein Length | 213 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 642682796 |
Product | beta-lactamase domain protein |
Protein accession | YP_001958732 |
Protein GI | 189499262 |
COG category | [R] General function prediction only |
COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.396725 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATCTGA AACAGTTCCG AACCGGAGGT GACAGAAACT TCGGCTATCT CGTCGCTGAC GAAGAGAGCA GGGAGGCTTT TGTTGTCGAT CCGTCCAACA ACCCTGCCCT GATTGTCGAT CATGCCCGGG AGAAGGGGTT CGGTATTCGT TATGTCTTTT GCACCCATGG TCATTCTGAC CACACCAATG GAAACGAGGA GATAGCACGC CTTACCGGTC TCGTCCCTCT GCTTTTCGGG TCGGTCTGTC CCGTCACCGC TATCAAAGTG CAGGACGGCG CGGTTTTTCC GCTCGGAAAT CTTGAAGTAA AGGTCATTCA CACACCGGGC CACACGCCTG ATTCACTCTG CATCTATGCA GGAGACGCAC TGTTTACCGG TGACACCCTT TTTGTGGGCA AGGTCGGCGG TACCGATCTG GGAGCTCAGG CTGAAGAGGA ATTCCGCTCA CTGCATGAGA GCATTATGGT ACTGCCTGAT AGTGTCAGGG TGTTCCCCGG TCACGATTAC GGTACGTCTC CGAACTCGAC CATCGGTGAC GAAAAGAAAA CCAATCCCTT TCTTTTGCAG CCCGACATTG CGGCTTTCAT CCATCTGAAA AAAAACTGGG CGGCCTACAA GAAAGAACAC GGGATAGCGT AA
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Protein sequence | MYLKQFRTGG DRNFGYLVAD EESREAFVVD PSNNPALIVD HAREKGFGIR YVFCTHGHSD HTNGNEEIAR LTGLVPLLFG SVCPVTAIKV QDGAVFPLGN LEVKVIHTPG HTPDSLCIYA GDALFTGDTL FVGKVGGTDL GAQAEEEFRS LHESIMVLPD SVRVFPGHDY GTSPNSTIGD EKKTNPFLLQ PDIAAFIHLK KNWAAYKKEH GIA
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