| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0259 |
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| Symbol | |
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| ID | 6373914 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 250181 |
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| End bp | 253198 |
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| Gene Length | 3018 bp |
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| Protein Length | 1005 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642682773 |
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| Product | Radical SAM domain protein |
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| Protein accession | YP_001958709 |
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| Protein GI | 189499239 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0535] Predicted Fe-S oxidoreductases
[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | [TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.285156 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAAACA GTATCGCTTC CTGGGACAGG TATTCAATAG ATGCGACGCC GATATATTTC
AGCAGAAAAA CAGCAGACTG GTTTGTGCCG AACCAGGAGG GCGACAGGGT TTTACAATCC
CTGTACAATA AAAACGGTGA TTGCTACGGA AAAGAAGACA ACCGGTTCCT TTCAAGACTT
CCTGAACAGG GATCCCCCGG CTACACAGGA CGGGCATCGT CTCTGACACT GAAAAACATA
CGGGAGCTGT GGTTTCACAT CACCAACCGC TGCAACATGG CATGTTCCCA CTGCCTTTTT
TCATCTTCAC CGGAAGAAGA GGCAGAACTT TCGGCTGAGG ACATACTCTC TCTTGCTGGT
GAAGCCTGGC AGCAGGGATG CAGGCTCTTT GCCCTGACCG GCGGAGAACC TCTTGTGCAC
CGTGAGATAG ACCGCATTGT AAACGGCATT CTCGAGCTTC CCGATACCCA TCTGGTTATT
CTGACCAACG GGCTCCTGAT AAAAAAACTT TTCAGCAGTC TCAACGGCGA TTCTCACCGC
GTCCATCTGC AAATCAGCCT GGATGGGCTT GAAGAAAACC ATGACTCGCT GCGGGGTAAA
GACGCTTTCA GCAAACTCAC AGCAAATCTT CAATGGCTTA AAAAAGAGGG CATTTTTTAT
ACCCTGTCGA TGTGTGTCAC CAGACAGAAT ATACCTGACA TGGAACCCAT GATTGATTTC
GCAGCCAGTG TCGGAGCAAA AAATGTGCAT TTCATGTGGT ATTTCATCCG GGGGCGAGGC
ACAGGACAGC AGTTTGCGCA TCCGGAAGAG CTCTTCATCA ATCTTACGCT TGCCGCACGA
AAGGCGGAGA AACTCGGAAT ACCTATTGAC AACATAGAAT CCTTGAAGAG CAGGGTGTTC
TCGCCGCCAG GCACCATTCA CGACGGATCC ACTGCCGGTT GGGAATCGCT TGCAATAGGC
CCTGACAAAA AACTTTACCC TTCGGCTGCA CTGATCGGCA TCCCTGAACT CTCAATATCA
CTGGATGAAG GACTCGTCAA TGCATGGAAA AACAGCCCAG TTCTTGAAAC TGTTCGCAAT
GCCTCCATTG TCGATACAGC TTCGCCGATG CGTTTTATTC TGGGCGGCGG GGATATCGAT
CACAGCTACA TACACAACGG AACGTTTTCC GGCAGTGACC CCTACCTGCC TCTGTATGAA
CGTACCGTGC TCTGGCTTAT CGCCGGATCC GTCCCGGAAG AGAACGCAAC AACCCGTAAC
CCTGCGCTTC GAGTGCAGAT GGGCGAAATA CTCGAAAGCT GCAGCGCCCA TGGCAGTATC
GCTCTGATTC ACTCGAACTG TCTGCTCGCT ACAGCTTCTC AAAGCAGTCT CTTCTCCATA
CAGGATTTCT ACACAGATGC CGTAGGTGAC AAAAATGAGG CTATACTCAA TCCTGTCGGC
TATGACACCG CTCTGGTTAA TCACATCCCG TCCGAGTACC GTTTCCGGGG ATATGGTTGC
GGCAGTCCTG TACTGGATGC CGGGATTTCC GAGGGAGATG ATATCGTAGA CCTGGGATGC
GGCAACGGTG TAGAATGCTT CATCGCTTCA AGGCTGACCG GAAAAAACGG CTCTGTCAGA
GGCATAGACA TGCTCGACCC CATGCTACAC ATGGCAAGAA AGGCCGAAAA AAGCGTAGCG
GAGAATCTCG GTTACAACAA TGTCAGCTTC CTCACCGGCT ACCTTGAAAC GTTACCTCTG
GAGACCGCCT CTGCAGATGT AGTGCTCTCC AACTGCGTCA TGAACCTTTC CGTCAACAAA
CGAAAAGCGT ATGCTGAAAT TCTGCGCGTC CTGAGGCCGG GAGGAAAACT GGTTATTTCG
GACGTTGTCT GCGAAACCGA GCCTGACGCG TCCATAAGTA ACGATGAGAC CCTGAGAGGA
GAGTGCATTG CCGGAGCGCT TTCCGAATCA CACCTGATGG CCCTGCTTGA AGAGACAGGA
TTCGAGGCAA CGCAGCTTAT CAAGCGTTTC CCCTACAGAA ACATACAGGG GCATCCCTTC
TATTCGCTCA CCTATTCATC CGTGAAACCC AGGCTCACGG AGACCGTTAC GGCAATGTAT
CGCGGGCCTC TTCCTGAACT TGTCACCTGT CGTGGAACAA TCCTGCGCCC TGGAAAAAAG
ACGTTCATCG ACAGAACAGA AGCTGAAATG CTTGGAGAGA GCCTGTTCAT TTTTGACGAA
CATGACTATG TAGTCAATAT TGAAGCGGAA AACTGCTGTT CCTGCTCAAT CGCCCCGGAT
GAAAAGCAAA TGAACGGGCA GGACAAAGAG TCCGGTTCCT CACCGGAAAA ACGTCACGCA
TCAGGCTGCA TGATCTGCGG GGAGCAACTC ATCTACACGG AAAATGAACA AGAGCATTCC
TGTGGCTACT GTGGCCGGAA GTACAGTTCA TCGTCACTAT GCGGCAAAGG ACATTATGTC
TGCGACACCT GCCATAGCGA TGATGCGGTC GAGGTTATAA AGCATATCTG CCTGGCGACC
GAAGAAACAG ACATGATAGA ACTTATGGAA CGGATCAGAT CTCACCCGTC CATACCGGTT
CATGGTCCGG AATACCACGC CATGATACCC GGTATCATTC TTGCGACGTG GAGAAATCTT
GGCGGCGACA TTCATGACAT GATCATTGAA AGCGGCATCA ACCGGGGCAA AACCATCCCT
GGCGGTTCCT GCGGTTTCAT GGGTATCTGC GGTGCGGCAA CCGGAACAGG CATCGCGTTC
AGCATCCTGC TCAAAGCAAA TCCTGTAAAA GCAGCGGAAA GAAAAAACGT TCAGCAGATA
ACCGCAGCGG TTCTGGAAGA GATCGCCGCA TTACAAGCCG CCCGATGCTG TCAAAGGGAT
TGCTGGATTG CCCTGAAAAA AGCTGCAGAG CTTTCAAAAG AGATCATGGA CATTCCGCTC
CGGGCAGAAA AGGTGCTGAA GTGCAAGCAG CATGAAGCAA ACAAGGAATG TTTCGGAAAA
AACTGCCCGA TATACTAA
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| Protein sequence | MRNSIASWDR YSIDATPIYF SRKTADWFVP NQEGDRVLQS LYNKNGDCYG KEDNRFLSRL
PEQGSPGYTG RASSLTLKNI RELWFHITNR CNMACSHCLF SSSPEEEAEL SAEDILSLAG
EAWQQGCRLF ALTGGEPLVH REIDRIVNGI LELPDTHLVI LTNGLLIKKL FSSLNGDSHR
VHLQISLDGL EENHDSLRGK DAFSKLTANL QWLKKEGIFY TLSMCVTRQN IPDMEPMIDF
AASVGAKNVH FMWYFIRGRG TGQQFAHPEE LFINLTLAAR KAEKLGIPID NIESLKSRVF
SPPGTIHDGS TAGWESLAIG PDKKLYPSAA LIGIPELSIS LDEGLVNAWK NSPVLETVRN
ASIVDTASPM RFILGGGDID HSYIHNGTFS GSDPYLPLYE RTVLWLIAGS VPEENATTRN
PALRVQMGEI LESCSAHGSI ALIHSNCLLA TASQSSLFSI QDFYTDAVGD KNEAILNPVG
YDTALVNHIP SEYRFRGYGC GSPVLDAGIS EGDDIVDLGC GNGVECFIAS RLTGKNGSVR
GIDMLDPMLH MARKAEKSVA ENLGYNNVSF LTGYLETLPL ETASADVVLS NCVMNLSVNK
RKAYAEILRV LRPGGKLVIS DVVCETEPDA SISNDETLRG ECIAGALSES HLMALLEETG
FEATQLIKRF PYRNIQGHPF YSLTYSSVKP RLTETVTAMY RGPLPELVTC RGTILRPGKK
TFIDRTEAEM LGESLFIFDE HDYVVNIEAE NCCSCSIAPD EKQMNGQDKE SGSSPEKRHA
SGCMICGEQL IYTENEQEHS CGYCGRKYSS SSLCGKGHYV CDTCHSDDAV EVIKHICLAT
EETDMIELME RIRSHPSIPV HGPEYHAMIP GIILATWRNL GGDIHDMIIE SGINRGKTIP
GGSCGFMGIC GAATGTGIAF SILLKANPVK AAERKNVQQI TAAVLEEIAA LQAARCCQRD
CWIALKKAAE LSKEIMDIPL RAEKVLKCKQ HEANKECFGK NCPIY
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