Gene Cphamn1_0252 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0252 
Symbol 
ID6373907 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp243996 
End bp244508 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content47% 
IMG OID642682766 
Productrare lipoprotein A 
Protein accessionYP_001958702 
Protein GI189499232 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0797] Lipoproteins 
TIGRFAM ID[TIGR00413] rare lipoprotein A 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATAACG GACGAATAGC ATTCGCCTCG CCTTTTTTTA TAGTCATTTT TTCTCTTCTC 
CAACTGACAG GGTGTCAGTC AAGCTCTAAT TATACATCGA TACAATCGGG AATCTCAGCA
GCACCGATTC CTAGCGAGAT AACAAGCTCG CTTCAGCTGG AGCGTGATTC TCTTGCTGCG
GCTGATGCGG AAGACGAACT CGGCAAACTG TTCATGGTCA AGGAAGGAAA AGCATCATAC
TATGCCGACA GGTTTCATGG CCGCCTTACA GCCAACGGTG AGCGCTTCAA TATGCATGAA
CTGACTGCCG CTCATAAATC CCTGCCCTTC GGCTCCATGG TACGCGTGAC CAACCTTAAC
AACGGCAGAA AAGTTATGGT CAGAATCAAT GACCGCGGTC CCTATATAAA AGGGAGAATC
ATCGATCTAT CACTCGAAGC AGCTAAAGAG ATCAACCTGC TGAAAAAAGG TGTCGCGAAA
GTACGTATAG AGGTCTATGA AGGTGATTCA TAG
 
Protein sequence
MYNGRIAFAS PFFIVIFSLL QLTGCQSSSN YTSIQSGISA APIPSEITSS LQLERDSLAA 
ADAEDELGKL FMVKEGKASY YADRFHGRLT ANGERFNMHE LTAAHKSLPF GSMVRVTNLN
NGRKVMVRIN DRGPYIKGRI IDLSLEAAKE INLLKKGVAK VRIEVYEGDS