Gene Cphamn1_0241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0241 
Symbol 
ID6373896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp233402 
End bp236077 
Gene Length2676 bp 
Protein Length891 aa 
Translation table11 
GC content51% 
IMG OID642682755 
ProductATPase, P-type (transporting), HAD superfamily, subfamily IC 
Protein accessionYP_001958691 
Protein GI189499221 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0474] Cation transport ATPase 
TIGRFAM ID[TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01517] plasma-membrane calcium-translocating P-type ATPase
[TIGR01523] potassium and/or sodium efflux P-type ATPase, fungal-type
[TIGR01116] sarco/endoplasmic reticulum calcium-translocating P-type ATPase 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATATTT TTTCCGACAG CATAGAAGAG GTTCTCGAAA AACTGGGTAC AACGTCAGGC 
GGGCTTTCCA CGAAAGAGGC TGAAGCTCGC ATCGCCCGCT ATGGGGAGAA CCGGCTCAGG
GAGGAAGAAA AAATTTCTGT CTGGGCGATT GTTCGACAGC AGTTTCAAAG TGTTCTTGTC
TGGCTGCTGA TTTTTGCCGT CATTATCTCT CTTTTGCTCG GCGATGTTAT CGAAAGCGCG
GTAATAGGGG GTATCCTTGT CGCTAACAGC GTCATCGGTT TTTTGCAGGA GTTCCGGGCG
GAAAAAGCAC TTGAAGCCCT GAAAAAAATC TCGGGATTGA AAGCAAAGGT GCTGCGTGAC
GGCCATATCG TGAAACTTGA AACGAACCTG CTTGTCCCGG GTGATGTTAT TCTGCTTGAG
ACAGGAGATC GTATTCCTGC CGACGCACGG CTTTTGCACC ATATGAATCT GGAGTGTCAG
GAGGCGATGC TGACCGGCGA GTCGACTCCT GTGTCCAAAA AAACTGATTC GGTCTCGTCC
GGAGCCCCGC TTGCCGAACG TTTCAACATG GTGTATTCGG GGACGATTGT CTCTAAAGGG
CGTGCTACGG CAATTGTCAC AGGAACCGGC ATGGAAACCG AACTTGGAAG GATTGCCGAG
CTTCTTTCTG ACGACAGGGA CGGGCGCCGA AGCCCTCTGC AGAAAAAGAT AAACCATTTT
TCCCGTCGCC TCGCTCTCAT CGTCATCATT GCCGCGGTGC TGATGTTTTT GCTTACCTGG
ATGTCGGGAG AGGATCTGCT CGAAACCTTT AAAACTGCGC TCAGCCTGGC TGTTGCCGCA
ATTCCTGAAG GTCTTCCGGC CGTAGTGGCC CTCACGCTGG CCAAGGGCGT GCAACGCATG
GTGAAACACA ACGCTATTGT TCGTCACCTT CCGGCGATAG AAACACTTGG TTCTTCTTCG
GTTATCTGTT CCGACAAGAC AGGGACCATG ACGGTTAACC GTATGAGCGT GAGGAAAATC
TATGCAGACG GGCAAGAGAT CGAGGTACAG GATAACAGAC AGGCAGGACA TGCCGGCAGG
GAAGATCTGG AACTTCTTTT CAGGATTGGC CTGCTCTGCA ACGACGCCCG GCCCGATCCG
GGTGGAGGGA TTTTCGGTGA TCCAACGGAA GCGGCTCTTC TGCTTTCAGC CCGGCATTAT
GGTCAGGAAC CTGACAAGGT CTCACAACGG TATCCGCGTA TCGACGAAAT AGGTTTCGAT
TCGGAGCGCA AGATGATGTC TACCCTGCAT GATGTTTCTG GAGGAGGGAA GGTGATGTAT
ACCAAAGGGG CTCCCGACGT GCTTTTGAGC CGTTGTACGC GGATTATGAA CAATGGTGAA
GTTATTCCGC TCGACAAGGC TACCCATGAT GCTATCATTC GCAAAAACGA GGCTTTTGCT
GCCGAAGCCT TACGCGTGCT TGGTTTCGCC TGGAAAGATG TCGGTGTACA GGACGATTTT
ACTGAGGACG ACCTGATTTT TGTCGGACTT CAGGCGATGA ACGATCCTCC GAGACCGGAG
GTGATTGATG CAGTCGCCAA ATGCCGTAAA GCAGGGATCA AGGTTGTGAT GATTACCGGA
GACCAGAAAC TGACGGCAGA GGCAATAGGT CGCGAACTGG GCATAACAGG ACGGGCAATG
ACCGGTGCAG ATCTTGACAC GGTCGAGGAT ATTGGTCGGG TTGTCGAGGA GGTCTCGATA
TTTGCCCGGG TCAGCCCCGA ACAGAAAATC AATATCGTTA CGGCATTGCA GAAAAATGAT
CATGTTGTCG CCATGACCGG TGACGGTGTC AATGACGCTC CGGCTTTGAA GCAGGCGGAT
ATTGGTGTCG CTATGGGGCA GGGGGGTACC GATGTTGCTC GTGAAGCATC GACCATGGTG
CTGATCGACG ATAATTTTGC TTCGATTGTC AAAGCTGTCG AGGAAGGAAG GGCGATCTTT
GATAATCTCA GAAAATTTGT TTTCTCTCTT CTCGCCGGAA ATATCAGCGA GGTGATGATT
ATAATTCTTG CTGTTATTGT TGGCCTCAAG CTTCCTCTCG TGGCAATCCA GATACTCTGG
ATCAATCTCG TGACAGATGG ACTGCCTGCA CTTGCTCTCG GGTTTGAGCC AAAAGCAAAG
AATCTCATGG CGCGTCCGCC AATCGCCAAA AATACCTTTA TTGTTGACAG GCTGATGATC
CTCAGGCTTG TCGTTGTCTG TGTTGTTATT ACAGCCGCTT GTCTCGGGCT GTATGTGCAT
GCGCTCTTTT CATCAGGCTG GAGCTGGGGG GAACGTCTCG GAAGTGCTGA CCCGGACTAT
CTTTATGCAT CCACCATGGC GTTTACCTCG CTGGTTCTCC TTGAAATGGT CAACGCTTTT
CATGCTAAAT CAGAAACGGA AAATATTTTC ACCGTAAAGG TTTTTTCCAA TCCCTGGCTT
ACAGCGGCCG TTGCGTTCTC CCTTGTTCTT CATCTTCTGG TTCTTTATAC CCCTCTGAAC
CAGGTTTTTT ACACCGTACC ACTGGGACTT GCCGATTGGG GAATGGTCAT GCTGGTATGC
GCCACACTTA TTCTTGCTGA TATGGTTTTC AAGTGGAAGG TTAAGCCAAA CCATTATGTT
CGACAAGGAG TCAACATTCA TACGTCAAAA AGGTGA
 
Protein sequence
MDIFSDSIEE VLEKLGTTSG GLSTKEAEAR IARYGENRLR EEEKISVWAI VRQQFQSVLV 
WLLIFAVIIS LLLGDVIESA VIGGILVANS VIGFLQEFRA EKALEALKKI SGLKAKVLRD
GHIVKLETNL LVPGDVILLE TGDRIPADAR LLHHMNLECQ EAMLTGESTP VSKKTDSVSS
GAPLAERFNM VYSGTIVSKG RATAIVTGTG METELGRIAE LLSDDRDGRR SPLQKKINHF
SRRLALIVII AAVLMFLLTW MSGEDLLETF KTALSLAVAA IPEGLPAVVA LTLAKGVQRM
VKHNAIVRHL PAIETLGSSS VICSDKTGTM TVNRMSVRKI YADGQEIEVQ DNRQAGHAGR
EDLELLFRIG LLCNDARPDP GGGIFGDPTE AALLLSARHY GQEPDKVSQR YPRIDEIGFD
SERKMMSTLH DVSGGGKVMY TKGAPDVLLS RCTRIMNNGE VIPLDKATHD AIIRKNEAFA
AEALRVLGFA WKDVGVQDDF TEDDLIFVGL QAMNDPPRPE VIDAVAKCRK AGIKVVMITG
DQKLTAEAIG RELGITGRAM TGADLDTVED IGRVVEEVSI FARVSPEQKI NIVTALQKND
HVVAMTGDGV NDAPALKQAD IGVAMGQGGT DVAREASTMV LIDDNFASIV KAVEEGRAIF
DNLRKFVFSL LAGNISEVMI IILAVIVGLK LPLVAIQILW INLVTDGLPA LALGFEPKAK
NLMARPPIAK NTFIVDRLMI LRLVVVCVVI TAACLGLYVH ALFSSGWSWG ERLGSADPDY
LYASTMAFTS LVLLEMVNAF HAKSETENIF TVKVFSNPWL TAAVAFSLVL HLLVLYTPLN
QVFYTVPLGL ADWGMVMLVC ATLILADMVF KWKVKPNHYV RQGVNIHTSK R