| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0240 |
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| Symbol | |
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| ID | 6373895 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | + |
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| Start bp | 230044 |
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| End bp | 233361 |
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| Gene Length | 3318 bp |
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| Protein Length | 1105 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 642682754 |
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| Product | trehalose synthase |
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| Protein accession | YP_001958690 |
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| Protein GI | 189499220 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases
[COG3281] Uncharacterized protein, probably involved in trehalose biosynthesis |
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| TIGRFAM ID | [TIGR02456] trehalose synthase
[TIGR02457] trehalose synthase-fused probable maltokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGCGAG CATCTGCATC CTATCAGCCT GAACCGCTCT GGTACAAGGA CGCCATCATT
TATGAGGCAC ATGTAAAGAC TTTTTTTGAC AGTAACAATG ACGGTGTCGG TGATTTTGAA
GGGTTGCGCC AGAAGCTGCC CTATCTGGAA AGTCTCGGTA TAACCGCAAT CTGGCTGCTT
CCTTTTTATC CTTCACCCCT GAGAGATGAC GGCTACGATA TTGCCGATTA CATGGAGGTC
AATCCTGACT ACGGTACCAT CGAGGATTTC AAAGCCTTTC TCGATGACGC GCATAAGCTC
GGACTGAAGG TGATTACCGA GCTTGTCATC AACCATACGT CCGATCAGCA CGCATGGTTC
CAGAGGGCCA GACAGGCAGA GCCGGGATCG GTCGAACGGG ATTTTTACAT GTGGAGCAGT
GATCCCAAGA AATACTCCGG CGTCCGCATC ATTTTCCAGG ATTTCGAGGC CTCGAACTGG
ACATGGGACC CTGTCGCCGG AGAGTATTAC TGGCATCGGT TCTATCATCA TCAGCCTGAT
CTGAACTTCG AAAATCCCGC GGTTGAAAAA GCCATTTACA AGGTGCTTGA TTACTGGCTG
GAGATGGGCG TCGACGGGTT GCGGCTCGAC GCGGTTCCCT ATCTCTATGC AGAGGAAGGA
ACCAACTGTG AGAACCTTCC CCGCACGCAC AAGTTTCTGC AGAGGCTGCG CAAGCATGTA
GACGGCAAGT TCCCGAACCG TATGCTTCTT GCCGAGGCAA ATCAGTGGCC GGAAGATGCC
GCCGAGTATT TCGGCGAAGG TGACGAATGT CATATGAATT TCCATTTCCC TCTGATGCCG
AGGATGTACA TGGCGCTGGA AATGGAAGAT CGTTTTCCGA TCATAGATAT TCTCGACCAG
ACACCCGGGA TTCCGGAAGA GTGCCAGTGG GCTTCCTTCC TTCGCAATCA TGATGAACTT
ACTCTTGAGA TGGTGACCGA TGAGGAGCGT GACTATATGC GCCGGGTGTA CGCGCATGAT
CCGAAGGCGC GCATCAATCT CGGTATACGC CGCCGTCTGG CGCCGCTTAT GTCGAATGAC
CGCAGAAAAA TCGAGCTGAT GAACATCATG CTCCTTTCCC TGCCCGGCAC TCCGGTTCTC
TACTACGGTG ACGAGATAGG TATGGGCGAT AATTTTTACC TCGGTGATCG TGACGGCGTT
CGTACTCCCA TGCAGTGGAA CGGTGACCGG AATGCAGGTT TTTCCAGAGC CAATCCCCAG
CAGTTGCAGC TGCCGGTGAT CATTGATCCG GAATACCATT ACGAGGGAGC CAATGTCGAG
GTACAGGAAA GCAACATCAA TTCGCTGCTC TGGTGGACAC GCCACATGCT CTCCACCTCC
CGCAGGTACA AAGCCCTCAG TCGCGGGGAT ATTATCTTTA TTCAGTCTCA GAATCCTCAG
GTCCTGATTT TTACCAGGAC ATACAAGGAT GAGACCATGC TGTGCATCAT CAACCTGTCG
CGTAACGCAC AGGCGGTCAC CATGGATCTG TCGGAATACG AAGGATATAT TCCTGAAGAG
GTGTTCAGCC TCAGTCATTT TCCCGGGATC TCTGCAAGGC CGTATACGGT TACGCTGGGT
CCTTACGGAT ATTTCTGGTT CAAGCTTGTC AGGAGTGAAG ATGAGATCGG GAGCCGACGC
TATATCGACA AGCCGTTTGC GAAAGTAGCC GCCATGGATG ACCTCTTTTC CGGCAAGGTT
CTTGACCGTC TTGAATCCAG AGTGCTGCCT CAGTATATAC GGGGTTGCAG ATGGTTTGGC
GGCAAGGCCC GCAAGATCGT CAGGGTCAGC GTCAACGATA GCATTCCTGT GCCAGCCTGT
CAAAACACGG TCTACCTGAT TGTCGAGGTA CGCTATCCGA GCGGCTCGAA CGATCTGTAT
CAGCTTCCGG TGACATTTCT GCCTACAGGA GAGTTCAATC CTGACGAAGA CTTTTTCATG
AAGCAGGTTA TCTGCAGTGT GAAGATCGGA GAGAACGAGG GGTATCTCTG CGATGCGACC
TATCAGAAGG AGTTCCATCG TTTCCTTCTC GACGTTATCA TCGCCGGAAA AGGCCTGAAG
GGGGGGATTT TCAAACTGAC AGCCGAAAAG GGCTCGACTC TGGAGGAGTA TCTGCCGCAG
GAAGAGGATG ATAGTATGAA CTCCGTGATT TTCGGTCTGG AGCAGAGCAA TACGTCGATC
ATGTATGATG ACAAGCTCTG TCTGAAGCTC TACCGCAAGA TCTCTTCAGG GATTTCTCCT
GAAGTTGAAA TCTGCCGCAC CTTGACTGAA AAGACATCGT TTGAGAGTTC TCCGGGCTAT
CTTGGAGCGC TTTACCTTTC CAGAAGCCGC AAGGATACCT CTTCTCTGGG CATCCTGCAG
AACTTTATCC CCAATGAGGG AGATGCCTGG AGCCAGACCC TGCACTATGT GCACCGTTAC
TATGAAGAGG TGCTTGTTCT GTTGCCGCAG CTCGAAGAGA TCCCGGAAAT TCCCCCGATA
GGAGGAGAGA CAGTCGAGAT GCCGGAGATC ATGCACGGGC TGATAGGTGA AATCTACCTC
GGGATGGTTA ACAAGCTTGC TGAGCGAACA GCAGAAATGC ATCTTTCTCT GGCCTCGCCG
GATCTTGGTC CTGATTTTCT GCCTGAAGCA TTTACCACGC TCTATCAGCG CTCCATATAC
CAGTCCATGC GTGAACAGGT GAAAAGAGGT ATGGTGATGC TCAAGGAGCA GATGAAAGGG
ATCGCGAAAG ATTATAAGGG AATCGCGGCT GATCTGCTTG GACGGGAGCA GGAGATACTG
GACCGGCTTT CACATATCAA AGCTCGCAGG ATCCCGGCAT CAAAGATCAG GATTCATGGT
GACTATCATC TCGGTCAGGT ACTCTGGACC GGTAAGGATT TTGTGATCAT TGACTTTGAA
GGCGAACCGG CACGCTCTAT CAGCGAGCGC AGGATCAAGC GTGCCGTGTT CCGTGATCTT
GCAGGAATGA TGCGGTCGTT CCATTACGCT GCCTTCAACG TCCTGATCCA GGATCGTTCT
ATAAGGCCTG AGGATGCTGA AAAGCTTGAG CCATGGGCGG AGTTGTGGAG TTTTTATACC
GGGCAGCATT TCTATGATGT GTATGCGGCC GCTGTTGGAG GACACGGTCT GATTCCTGAA
AATATTACAG AACAGCACCT TCTGCTTCGC TCCTATCTCA TGGACAAGGC TATTTATGAA
TTGAACTATG AGCTGAACAA CCGTCCTGAG TGGGTAGGCA TAGCCCTGAA GGGTCTGCAG
CGGCTGCTCG AATCCTGA
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| Protein sequence | MPRASASYQP EPLWYKDAII YEAHVKTFFD SNNDGVGDFE GLRQKLPYLE SLGITAIWLL
PFYPSPLRDD GYDIADYMEV NPDYGTIEDF KAFLDDAHKL GLKVITELVI NHTSDQHAWF
QRARQAEPGS VERDFYMWSS DPKKYSGVRI IFQDFEASNW TWDPVAGEYY WHRFYHHQPD
LNFENPAVEK AIYKVLDYWL EMGVDGLRLD AVPYLYAEEG TNCENLPRTH KFLQRLRKHV
DGKFPNRMLL AEANQWPEDA AEYFGEGDEC HMNFHFPLMP RMYMALEMED RFPIIDILDQ
TPGIPEECQW ASFLRNHDEL TLEMVTDEER DYMRRVYAHD PKARINLGIR RRLAPLMSND
RRKIELMNIM LLSLPGTPVL YYGDEIGMGD NFYLGDRDGV RTPMQWNGDR NAGFSRANPQ
QLQLPVIIDP EYHYEGANVE VQESNINSLL WWTRHMLSTS RRYKALSRGD IIFIQSQNPQ
VLIFTRTYKD ETMLCIINLS RNAQAVTMDL SEYEGYIPEE VFSLSHFPGI SARPYTVTLG
PYGYFWFKLV RSEDEIGSRR YIDKPFAKVA AMDDLFSGKV LDRLESRVLP QYIRGCRWFG
GKARKIVRVS VNDSIPVPAC QNTVYLIVEV RYPSGSNDLY QLPVTFLPTG EFNPDEDFFM
KQVICSVKIG ENEGYLCDAT YQKEFHRFLL DVIIAGKGLK GGIFKLTAEK GSTLEEYLPQ
EEDDSMNSVI FGLEQSNTSI MYDDKLCLKL YRKISSGISP EVEICRTLTE KTSFESSPGY
LGALYLSRSR KDTSSLGILQ NFIPNEGDAW SQTLHYVHRY YEEVLVLLPQ LEEIPEIPPI
GGETVEMPEI MHGLIGEIYL GMVNKLAERT AEMHLSLASP DLGPDFLPEA FTTLYQRSIY
QSMREQVKRG MVMLKEQMKG IAKDYKGIAA DLLGREQEIL DRLSHIKARR IPASKIRIHG
DYHLGQVLWT GKDFVIIDFE GEPARSISER RIKRAVFRDL AGMMRSFHYA AFNVLIQDRS
IRPEDAEKLE PWAELWSFYT GQHFYDVYAA AVGGHGLIPE NITEQHLLLR SYLMDKAIYE
LNYELNNRPE WVGIALKGLQ RLLES
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