Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0238 |
Symbol | |
ID | 6373893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 226660 |
End bp | 227751 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642682752 |
Product | peptide chain release factor 2 |
Protein accession | YP_001958688 |
Protein GI | 189499218 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1186] Protein chain release factor B |
TIGRFAM ID | [TIGR00020] peptide chain release factor 2 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000385966 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGAAGGAGC AAAAGAGCGT CTGCACGAGA TACACCACCG CATTGAACAG TTACGGGGGT ATCTTTGACG TTGACGAACG TTTGCACAAA ATAGGTGAAC TCGAGCAGAT CACCACAGAA GAAAACTTCT GGGAGAACCA GCAGGAAGCC AACAAGATCG TAAAAGAGAT CAACGACCAT AAACTATGGA CTGAAGGATT TCTCGCGCTT GAAAAACAAA CCGCTGACCT CAGGGAAGAA CTGGAAATCG CTGAAGAACT CGGGGAAGAG TCACTTGCGG AAGAAATAGA CTCGCGCATC GGTTCGATCG AGCAGAAAAT CGCTGAGATC GAATTCAAAA ACATGCTCTC CGGTAAAGAC GATCCCGGCA ACGCACTGCT CACTATCAAT GCCGGTGCTG GCGGCACCGA AGCACAGGAC TGGGCGGAGA TGCTCTACCG CATGTACCTG CGCTGGGCGG AACGTAAAGG GTTCAAGATT TTCACCGATG ACTATCAGGA AGGCGATGGC GCAGGCATAA AAACCGCGAC GCTTGAGATA CAGGGGCCCT ATGCATACGG CTACCTGAAA GCTGAAAACG GCGTCCATCG GCTGGTAAGG GTCTCTCCTT TCGATTCGAA CGCTCGCCGC CACACCTCGT TTGCCAGTGT CTACTCCTAC CCGGAAGCGC CGCCCGATGC TGAAATAGAG ATTCGCAAGG AGGACCTTGA ACTTTCCACC TTCCGCAGCG GCGGCAAAGG CGGTCAGAAC GTCAACAAGG TTGAAACAGC CGTACGCATC AAGCATATCC CTTCCGGGAT TGTCGTCTCC TGCCAACAGG AGCGTTCGCA GTTCCAGAAC CGTGAACGGG CGACAAAAAT GCTGCGGGCA CAGCTTTACA AAAAGCAGCG TGAAGAGGAA GAGGCAAGAA AACAGGCCGT TGAGGGCACG AAGAAAAAAA TCGAATGGGG TAGCCAGATC CGCAGCTATG TCATGGATGA CAGAAGGATC AAGGACCACA GAACAAATTA TGAACGACAC GACATCGAAA ATGTCCTTGA CGGCGATATC GACGATTTTA TAGAAAAATA TCTTTCGGAA TTCACCAACT GA
|
Protein sequence | MKEQKSVCTR YTTALNSYGG IFDVDERLHK IGELEQITTE ENFWENQQEA NKIVKEINDH KLWTEGFLAL EKQTADLREE LEIAEELGEE SLAEEIDSRI GSIEQKIAEI EFKNMLSGKD DPGNALLTIN AGAGGTEAQD WAEMLYRMYL RWAERKGFKI FTDDYQEGDG AGIKTATLEI QGPYAYGYLK AENGVHRLVR VSPFDSNARR HTSFASVYSY PEAPPDAEIE IRKEDLELST FRSGGKGGQN VNKVETAVRI KHIPSGIVVS CQQERSQFQN RERATKMLRA QLYKKQREEE EARKQAVEGT KKKIEWGSQI RSYVMDDRRI KDHRTNYERH DIENVLDGDI DDFIEKYLSE FTN
|
| |