Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0233 |
Symbol | |
ID | 6373888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 221828 |
End bp | 223999 |
Gene Length | 2172 bp |
Protein Length | 723 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 642682747 |
Product | Radical SAM domain protein |
Protein accession | YP_001958683 |
Protein GI | 189499213 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.677011 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGATTT GCCTGATAAA TGCCCTAACC ATCAGTGATT TGGGCTCATC TGAACCATCA AGGGATTCAG AACAAGTGGA AATCTCTGCC CCCCTTGGAA TTCTTGGCCT GGCATCGATG GTTCAACGCG AATGCAAAAA TATTGACACC ACCATTATCA ACCTGAACAA ACTGTATTTA GAATACCTCA AAGAACAAAA ATCAAGTTCT AAAGCCACGT TTGTAGACAC TATTATCGAT CATATCGAAA CCTGTGCCCC CTCACCGGAC GTCATGGGTT TCAGCACCAT TTGCAGCTCA TACCCGTTGA CGCTCAGACT GGCAACGCTC TACAAAAAGA GACATAGCAA CACCACGGTC ATACTTGGTG GGCCACAAGC TTCGGCGACC GATCTTGCAT CAATAAAAGC ATTTCCTGAA ATCGATATGA TTTTCAGAGG AGAAGCCGAA TATGGCTTTG TTTCTTTCCT GGAATCAATG CAAGAAAACA AACCGGGGCA TCTCTACAAC ATTAAAGGTC TGACTTTCAG AAACAGCAAC AACATCATTC GTAATGCCAA TGCTGATCCC GTCATGGACC TTGATAGCCT CCCGGTTCCT GCATATGATC TCGACCCCTA CATTAATAAC TACAAAACGC TGTCACTTGA AATCGGCCGA GGATGCCCCT ACAGTTGCTC CTTCTGTTCG ACCAGTACTT TTTTCGGGAG AAAATTCAGG CTTAAATCCC CCGGTACGAT CCTCGATCAA ATGCGGTTCA TTAAAAGAAA ATTTGGAATC GACAATATAG GACTCGACCA TGATATGTTC TCCGCTGACA GAAAAAAGGT ACGTGCTTTT TGTGAAACAC TTATCGCCTC CGGAGAGAAA TTTTATTGGG GCTGCAGTGC CCGTGTGGAC TGTGTGGATA ATGATTTACT TGCTTTGATG GCACAAGCCG GATGCAACGG GATTTTTTTC GGCATAGAAA GTGCTTCAAA GAGAATGCAA AAATCCATCA ACAAGAATCT TGATTTAGCC AATGCTGTCG ACACAATTGC GCATGCCGAC AAAATGGGCA TAAAAAGTGG GGTCTCACTC ATAACCGCTT TCCCTGATGA AACCGATGAA GAATTAAACA ACACCTTAAA CTTCTTTATC GGCTCGCTCC GATTCGACAA TGCCGCTCCA CAGATCGGCA TTCTTGCCCC TCTTGCCGGC TCACCGCTGT ACAACAAACA CAAAGATGAA CTGGTCCTCG ATCATATCTT TTCTGAGATG TCCTTCCAGG GATGGACATT CGATGATCAG GACCTAACCC TGATAGAACA ACATCCTGAA GTCTTTCCCG ACTTTTATTC GATTCCAAAC CCGGAGATCC CACGCAGGGA ATTCAAACAA ATCCGCGATT TCGTCACAGC ACTACAGGTA TGGTTTCGCT GGCTCCCGGT AGCAATGCAG CAGGAATCCG CCAACATGCT GAAAATCAGC CGTCACTGGA TCCAATGGTG TGTGGAGAAC AATATTCCGG AAAAAATAGA CGATGAAATA CCCTACTATT GCCATAGACG GTTTGCCGAT GACTTCCTGA GATTCATCAA CGACGTCTAT ATACCCCGGC TATCTTCACA TCAGGAAATC ATTGCAGAAC TCACCAAAAC CGAAGGATTT TTCCACCCGT ACAAAGACCA CCCTGAAGAT GCAAAAGAAG AAACAGTTTC AGGCAGTGAA TCAGATACCA TGAACGACGA TAAAGGCGGT ACTACAATCG CATCGTCCAG TCATCTCTTT TCTCTTGCCT CATATCCATA TATCCCTGAC AATGTACTTG TTACCGATTT GAACATAGAC TACAAGAAAC TCCTCGAATG CCTTCGCAAA AAAGAGGACC TTAAGCGTGT CAAACAAAAC AAAGTCACCA TTGCCTTCAG GGAGATTGAA CATGGAGATA TAAAAATTCA AGTCAGGCAA CTCAGTACCC TTTCAAAAGA AATCCTCCAT TTATGCAACG GATTGCTGTC AATCAGCGAA ATCATCTCCC TGTTCTCACA AAAGCACACG CAAATCAATG GCGTTCCGGT TCAGAAGGCC GCTACATTCA TGCTCATTGA GCTTTTTAAA CAAGGGTTGA TAACGCTTTG CGATGAAAAG CAGGAAGGAA AAGATGAGTT GCCGCTGAAA TCATCGGCCT AA
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Protein sequence | MQICLINALT ISDLGSSEPS RDSEQVEISA PLGILGLASM VQRECKNIDT TIINLNKLYL EYLKEQKSSS KATFVDTIID HIETCAPSPD VMGFSTICSS YPLTLRLATL YKKRHSNTTV ILGGPQASAT DLASIKAFPE IDMIFRGEAE YGFVSFLESM QENKPGHLYN IKGLTFRNSN NIIRNANADP VMDLDSLPVP AYDLDPYINN YKTLSLEIGR GCPYSCSFCS TSTFFGRKFR LKSPGTILDQ MRFIKRKFGI DNIGLDHDMF SADRKKVRAF CETLIASGEK FYWGCSARVD CVDNDLLALM AQAGCNGIFF GIESASKRMQ KSINKNLDLA NAVDTIAHAD KMGIKSGVSL ITAFPDETDE ELNNTLNFFI GSLRFDNAAP QIGILAPLAG SPLYNKHKDE LVLDHIFSEM SFQGWTFDDQ DLTLIEQHPE VFPDFYSIPN PEIPRREFKQ IRDFVTALQV WFRWLPVAMQ QESANMLKIS RHWIQWCVEN NIPEKIDDEI PYYCHRRFAD DFLRFINDVY IPRLSSHQEI IAELTKTEGF FHPYKDHPED AKEETVSGSE SDTMNDDKGG TTIASSSHLF SLASYPYIPD NVLVTDLNID YKKLLECLRK KEDLKRVKQN KVTIAFREIE HGDIKIQVRQ LSTLSKEILH LCNGLLSISE IISLFSQKHT QINGVPVQKA ATFMLIELFK QGLITLCDEK QEGKDELPLK SSA
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