Gene Cphamn1_0233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0233 
Symbol 
ID6373888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp221828 
End bp223999 
Gene Length2172 bp 
Protein Length723 aa 
Translation table11 
GC content45% 
IMG OID642682747 
ProductRadical SAM domain protein 
Protein accessionYP_001958683 
Protein GI189499213 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.677011 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATTT GCCTGATAAA TGCCCTAACC ATCAGTGATT TGGGCTCATC TGAACCATCA 
AGGGATTCAG AACAAGTGGA AATCTCTGCC CCCCTTGGAA TTCTTGGCCT GGCATCGATG
GTTCAACGCG AATGCAAAAA TATTGACACC ACCATTATCA ACCTGAACAA ACTGTATTTA
GAATACCTCA AAGAACAAAA ATCAAGTTCT AAAGCCACGT TTGTAGACAC TATTATCGAT
CATATCGAAA CCTGTGCCCC CTCACCGGAC GTCATGGGTT TCAGCACCAT TTGCAGCTCA
TACCCGTTGA CGCTCAGACT GGCAACGCTC TACAAAAAGA GACATAGCAA CACCACGGTC
ATACTTGGTG GGCCACAAGC TTCGGCGACC GATCTTGCAT CAATAAAAGC ATTTCCTGAA
ATCGATATGA TTTTCAGAGG AGAAGCCGAA TATGGCTTTG TTTCTTTCCT GGAATCAATG
CAAGAAAACA AACCGGGGCA TCTCTACAAC ATTAAAGGTC TGACTTTCAG AAACAGCAAC
AACATCATTC GTAATGCCAA TGCTGATCCC GTCATGGACC TTGATAGCCT CCCGGTTCCT
GCATATGATC TCGACCCCTA CATTAATAAC TACAAAACGC TGTCACTTGA AATCGGCCGA
GGATGCCCCT ACAGTTGCTC CTTCTGTTCG ACCAGTACTT TTTTCGGGAG AAAATTCAGG
CTTAAATCCC CCGGTACGAT CCTCGATCAA ATGCGGTTCA TTAAAAGAAA ATTTGGAATC
GACAATATAG GACTCGACCA TGATATGTTC TCCGCTGACA GAAAAAAGGT ACGTGCTTTT
TGTGAAACAC TTATCGCCTC CGGAGAGAAA TTTTATTGGG GCTGCAGTGC CCGTGTGGAC
TGTGTGGATA ATGATTTACT TGCTTTGATG GCACAAGCCG GATGCAACGG GATTTTTTTC
GGCATAGAAA GTGCTTCAAA GAGAATGCAA AAATCCATCA ACAAGAATCT TGATTTAGCC
AATGCTGTCG ACACAATTGC GCATGCCGAC AAAATGGGCA TAAAAAGTGG GGTCTCACTC
ATAACCGCTT TCCCTGATGA AACCGATGAA GAATTAAACA ACACCTTAAA CTTCTTTATC
GGCTCGCTCC GATTCGACAA TGCCGCTCCA CAGATCGGCA TTCTTGCCCC TCTTGCCGGC
TCACCGCTGT ACAACAAACA CAAAGATGAA CTGGTCCTCG ATCATATCTT TTCTGAGATG
TCCTTCCAGG GATGGACATT CGATGATCAG GACCTAACCC TGATAGAACA ACATCCTGAA
GTCTTTCCCG ACTTTTATTC GATTCCAAAC CCGGAGATCC CACGCAGGGA ATTCAAACAA
ATCCGCGATT TCGTCACAGC ACTACAGGTA TGGTTTCGCT GGCTCCCGGT AGCAATGCAG
CAGGAATCCG CCAACATGCT GAAAATCAGC CGTCACTGGA TCCAATGGTG TGTGGAGAAC
AATATTCCGG AAAAAATAGA CGATGAAATA CCCTACTATT GCCATAGACG GTTTGCCGAT
GACTTCCTGA GATTCATCAA CGACGTCTAT ATACCCCGGC TATCTTCACA TCAGGAAATC
ATTGCAGAAC TCACCAAAAC CGAAGGATTT TTCCACCCGT ACAAAGACCA CCCTGAAGAT
GCAAAAGAAG AAACAGTTTC AGGCAGTGAA TCAGATACCA TGAACGACGA TAAAGGCGGT
ACTACAATCG CATCGTCCAG TCATCTCTTT TCTCTTGCCT CATATCCATA TATCCCTGAC
AATGTACTTG TTACCGATTT GAACATAGAC TACAAGAAAC TCCTCGAATG CCTTCGCAAA
AAAGAGGACC TTAAGCGTGT CAAACAAAAC AAAGTCACCA TTGCCTTCAG GGAGATTGAA
CATGGAGATA TAAAAATTCA AGTCAGGCAA CTCAGTACCC TTTCAAAAGA AATCCTCCAT
TTATGCAACG GATTGCTGTC AATCAGCGAA ATCATCTCCC TGTTCTCACA AAAGCACACG
CAAATCAATG GCGTTCCGGT TCAGAAGGCC GCTACATTCA TGCTCATTGA GCTTTTTAAA
CAAGGGTTGA TAACGCTTTG CGATGAAAAG CAGGAAGGAA AAGATGAGTT GCCGCTGAAA
TCATCGGCCT AA
 
Protein sequence
MQICLINALT ISDLGSSEPS RDSEQVEISA PLGILGLASM VQRECKNIDT TIINLNKLYL 
EYLKEQKSSS KATFVDTIID HIETCAPSPD VMGFSTICSS YPLTLRLATL YKKRHSNTTV
ILGGPQASAT DLASIKAFPE IDMIFRGEAE YGFVSFLESM QENKPGHLYN IKGLTFRNSN
NIIRNANADP VMDLDSLPVP AYDLDPYINN YKTLSLEIGR GCPYSCSFCS TSTFFGRKFR
LKSPGTILDQ MRFIKRKFGI DNIGLDHDMF SADRKKVRAF CETLIASGEK FYWGCSARVD
CVDNDLLALM AQAGCNGIFF GIESASKRMQ KSINKNLDLA NAVDTIAHAD KMGIKSGVSL
ITAFPDETDE ELNNTLNFFI GSLRFDNAAP QIGILAPLAG SPLYNKHKDE LVLDHIFSEM
SFQGWTFDDQ DLTLIEQHPE VFPDFYSIPN PEIPRREFKQ IRDFVTALQV WFRWLPVAMQ
QESANMLKIS RHWIQWCVEN NIPEKIDDEI PYYCHRRFAD DFLRFINDVY IPRLSSHQEI
IAELTKTEGF FHPYKDHPED AKEETVSGSE SDTMNDDKGG TTIASSSHLF SLASYPYIPD
NVLVTDLNID YKKLLECLRK KEDLKRVKQN KVTIAFREIE HGDIKIQVRQ LSTLSKEILH
LCNGLLSISE IISLFSQKHT QINGVPVQKA ATFMLIELFK QGLITLCDEK QEGKDELPLK
SSA