Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0178 |
Symbol | |
ID | 6373832 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 174339 |
End bp | 175583 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642682696 |
Product | 3-oxoacyl-(acyl-carrier-protein) synthase 2 |
Protein accession | YP_001958633 |
Protein GI | 189499163 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.0000821615 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGTCAGG AACGCAAACG CATTGTTGTT ACCGGTATAG GGGTGTTATC TCCTGTCGGT CTGTCAAAGG AAGAACTCAA AGCATCCCTT TATCAGGGAA AAAGCGGTGC TGCGCCCATA ACCTATTTTG ACACGAACGG CTTTTCAACT CGTTTTGCCT GTGAATTGAA AGGGTTCAAG GCTGAGGACT ATATGGATAC CAAATCCTCC TCACGCATGG ACCCCTTCAG TCAGTATGCC GTCATAGCTG CTGAGCAGGC CCTGAAGGAT TCCTGTCTTG ACCTTTCCTC AATCGATCCC GCGAGAATTG GTGTCGTTCA CGGATCAGGA ACCGGCGGCA TGACCATACA TGACGCACAG ATGCGGGTAT TTCTCGAAAG AGGGCCCCGC AGAATAAGCC CGTTTTTCAT CCCTATGCTT ATTCCTGACA TCGCTGCCGG ACAGATCTCG ATGAGGAACA AGTTGATGGG ACCGAACTAT GCCACTGCCT CGGCATGCGC CACTTCCCTG CACGCAATTA TAGACGCATG GATGCTTCTT CAGCTCGACA TGGCAGACTA TATGGTCTGT GGTGGTTCAG AAGCCGCTAT CACGCCAATG AGCGTCGGAG GGTTCAACGC CGCAAGGGCG CTGTCAACGC GCAATGATGA TCCTGAAACC GCATCACGGC CTTACGACAG GGACCGGGAC GGCTTCGTAA TGGGAGAAGG CGCAGGCTCT CTGATCCTGG AAACACTTGA GTCAGCGCAG TCGCGCGGGG CCAAAATATA CGGCGAACTT GCCGGTGTCG GCGCTTCAGC AGATGCCCAT CATCTCACTG CCCCCCATCC GGAAGGTGCG GGCGCATTAA ACGCCATGAA AAGCGCTCTC GCTCAAGCAG GGATTACGCC TGAAGCTATC GACTATGTCA ATACACATGG CACGGCCACA CCGCTTGGCG ATTTAGCCGA GCTCAAAGCC CTCAGCAAGC TCTTCGGTGA TCACGCAAAA AAAATCAGCA TCAGCTCGAC CAAATCAATG ACAGGTCATC TGCTCGGCGC TGCAGGTGTC GTAGAGTCAA TTGCCTGTCT TCTTGCACTG GAAAGTCAGG TTGTGCCTCC TACGATCAAT ATCGAGAACC TTGACCCTGA AGTTGATCTG GATGTCACTC CCAACACGCC TACAGAACGA AAAATCGACT ACGTTCTCAA CAACGGCTTT GGCTTTGGCG GTCATAACGC TACGCTTATT TTCAAAAAAA TATAG
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Protein sequence | MGQERKRIVV TGIGVLSPVG LSKEELKASL YQGKSGAAPI TYFDTNGFST RFACELKGFK AEDYMDTKSS SRMDPFSQYA VIAAEQALKD SCLDLSSIDP ARIGVVHGSG TGGMTIHDAQ MRVFLERGPR RISPFFIPML IPDIAAGQIS MRNKLMGPNY ATASACATSL HAIIDAWMLL QLDMADYMVC GGSEAAITPM SVGGFNAARA LSTRNDDPET ASRPYDRDRD GFVMGEGAGS LILETLESAQ SRGAKIYGEL AGVGASADAH HLTAPHPEGA GALNAMKSAL AQAGITPEAI DYVNTHGTAT PLGDLAELKA LSKLFGDHAK KISISSTKSM TGHLLGAAGV VESIACLLAL ESQVVPPTIN IENLDPEVDL DVTPNTPTER KIDYVLNNGF GFGGHNATLI FKKI
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