Gene Cphamn1_0163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0163 
Symbol 
ID6373817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp160798 
End bp161280 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content46% 
IMG OID642682682 
Productsingle-strand binding protein 
Protein accessionYP_001958619 
Protein GI189499149 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000810976 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGT TAAAAATGCC TGAAATCAAC AGTGTTGTCA TCGCTGGAAA TTTGACGAAA 
GACCCGGTCT TTCGCCAGAC AAATTCCGGA GGAACGCCTG TAGTAAATTT TTCGATAGCA
TGTAACCGTC GTTTCAGGGA CAGTAACCAT CAATGGCAGG AAGATGTGTG TTATGTTGGT
GTTGTCGCAT GGAATAAACT GGCTGAGAGC TGTCGTGACA ACCTGAAGAG AAGTGCCGCT
GTTCTTGTTG ACGGAGAACT GCAAAGCAGA ACATGGAAAG CGCAGGATGG TTCATCACGA
ACCGTTGTTG AAATAAAAGC GCGTAGAATC CAGTTCCTCA ACAAGCGCAA GAAACATGAG
GACGAAGATG GCATTTCAGG ATTTGTCGAA GATGATAGCC ACAGCGAAAA CGGCATGGAA
CACAACAGTC GAGGAGACGG TGCAGGCCAT GTCTACGAGT ATAAATATCT TTCTTCCGAA
TAA
 
Protein sequence
MAELKMPEIN SVVIAGNLTK DPVFRQTNSG GTPVVNFSIA CNRRFRDSNH QWQEDVCYVG 
VVAWNKLAES CRDNLKRSAA VLVDGELQSR TWKAQDGSSR TVVEIKARRI QFLNKRKKHE
DEDGISGFVE DDSHSENGME HNSRGDGAGH VYEYKYLSSE