Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0163 |
Symbol | |
ID | 6373817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 160798 |
End bp | 161280 |
Gene Length | 483 bp |
Protein Length | 160 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 642682682 |
Product | single-strand binding protein |
Protein accession | YP_001958619 |
Protein GI | 189499149 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0629] Single-stranded DNA-binding protein |
TIGRFAM ID | [TIGR00621] single stranded DNA-binding protein (ssb) |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000810976 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAGT TAAAAATGCC TGAAATCAAC AGTGTTGTCA TCGCTGGAAA TTTGACGAAA GACCCGGTCT TTCGCCAGAC AAATTCCGGA GGAACGCCTG TAGTAAATTT TTCGATAGCA TGTAACCGTC GTTTCAGGGA CAGTAACCAT CAATGGCAGG AAGATGTGTG TTATGTTGGT GTTGTCGCAT GGAATAAACT GGCTGAGAGC TGTCGTGACA ACCTGAAGAG AAGTGCCGCT GTTCTTGTTG ACGGAGAACT GCAAAGCAGA ACATGGAAAG CGCAGGATGG TTCATCACGA ACCGTTGTTG AAATAAAAGC GCGTAGAATC CAGTTCCTCA ACAAGCGCAA GAAACATGAG GACGAAGATG GCATTTCAGG ATTTGTCGAA GATGATAGCC ACAGCGAAAA CGGCATGGAA CACAACAGTC GAGGAGACGG TGCAGGCCAT GTCTACGAGT ATAAATATCT TTCTTCCGAA TAA
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Protein sequence | MAELKMPEIN SVVIAGNLTK DPVFRQTNSG GTPVVNFSIA CNRRFRDSNH QWQEDVCYVG VVAWNKLAES CRDNLKRSAA VLVDGELQSR TWKAQDGSSR TVVEIKARRI QFLNKRKKHE DEDGISGFVE DDSHSENGME HNSRGDGAGH VYEYKYLSSE
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