Gene Cphamn1_0161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0161 
Symbol 
ID6373815 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp159342 
End bp160112 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content50% 
IMG OID642682680 
Productexodeoxyribonuclease III Xth 
Protein accessionYP_001958617 
Protein GI189499147 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.011362 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGATAG CAAGCTGGAA CATCAACGGC ATCCGTGCGC GCAGGGACAG TTTGCTCGGA 
TGGATCGACC GGAAAAAACC GGATATTTTG GTGCTCGAAG AACTCAAGGC ACAGGAGAAG
GATATTCCCG AAGAGATAGT GGCGATGCAG GGATATAAAA AATACTGGAA CGGCTCGGCA
TTCAGGAAGG GTTACAGCGG GGTCGGCCTT CTTCTTAAAG AAGGGCTTTG TGGCGAGTGC
CGCCTTGAAA TACCGGAGTT TGACTGCGAA AACCGGACAG TCGTCCTTCA TGGCAGTAAC
CTCAGTGTTA TCGGAACCTA TGTCCCGAGA GGCGATGGAG ATGCACACTA CGCGGTAAAA
CTCGGTTATC TTTCAGACCT GGGCACCTAT ATTCTTGAAC TTCTGCGGGA GGGAAGGCAG
GTGATACATA CCGGAGATAT CAATGTGGCC CACACAGATC TCGATGTACA TCACTCCCAG
AACAAGCCCG GTATAGTCGG GCTTCGTCCT GAAGAAAGGG CGGCTATTGA CAGGCATCTT
GAGATTGGCC TGCACGATAT TATGAGAGAG CGGTTTCCTG ACAAAAAAGA CATGTTCACC
TGGTGGCCAT ACTGGAAGGG TGCCCGTGAA CGAAATCTTG GATGGAGAAT TGATTGCTTT
TATCTGTCGA AAGGGCTTAT CGGGGATGTG GTTGACGTTC GCATTGATAG TGCTGAAAAA
AGCTCGGACC ATGCTCCGGT AATTCTGGAT ATCCGCTCTT GCGCTCTCTG A
 
Protein sequence
MRIASWNING IRARRDSLLG WIDRKKPDIL VLEELKAQEK DIPEEIVAMQ GYKKYWNGSA 
FRKGYSGVGL LLKEGLCGEC RLEIPEFDCE NRTVVLHGSN LSVIGTYVPR GDGDAHYAVK
LGYLSDLGTY ILELLREGRQ VIHTGDINVA HTDLDVHHSQ NKPGIVGLRP EERAAIDRHL
EIGLHDIMRE RFPDKKDMFT WWPYWKGARE RNLGWRIDCF YLSKGLIGDV VDVRIDSAEK
SSDHAPVILD IRSCAL