Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0161 |
Symbol | |
ID | 6373815 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 159342 |
End bp | 160112 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642682680 |
Product | exodeoxyribonuclease III Xth |
Protein accession | YP_001958617 |
Protein GI | 189499147 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.011362 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGGATAG CAAGCTGGAA CATCAACGGC ATCCGTGCGC GCAGGGACAG TTTGCTCGGA TGGATCGACC GGAAAAAACC GGATATTTTG GTGCTCGAAG AACTCAAGGC ACAGGAGAAG GATATTCCCG AAGAGATAGT GGCGATGCAG GGATATAAAA AATACTGGAA CGGCTCGGCA TTCAGGAAGG GTTACAGCGG GGTCGGCCTT CTTCTTAAAG AAGGGCTTTG TGGCGAGTGC CGCCTTGAAA TACCGGAGTT TGACTGCGAA AACCGGACAG TCGTCCTTCA TGGCAGTAAC CTCAGTGTTA TCGGAACCTA TGTCCCGAGA GGCGATGGAG ATGCACACTA CGCGGTAAAA CTCGGTTATC TTTCAGACCT GGGCACCTAT ATTCTTGAAC TTCTGCGGGA GGGAAGGCAG GTGATACATA CCGGAGATAT CAATGTGGCC CACACAGATC TCGATGTACA TCACTCCCAG AACAAGCCCG GTATAGTCGG GCTTCGTCCT GAAGAAAGGG CGGCTATTGA CAGGCATCTT GAGATTGGCC TGCACGATAT TATGAGAGAG CGGTTTCCTG ACAAAAAAGA CATGTTCACC TGGTGGCCAT ACTGGAAGGG TGCCCGTGAA CGAAATCTTG GATGGAGAAT TGATTGCTTT TATCTGTCGA AAGGGCTTAT CGGGGATGTG GTTGACGTTC GCATTGATAG TGCTGAAAAA AGCTCGGACC ATGCTCCGGT AATTCTGGAT ATCCGCTCTT GCGCTCTCTG A
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Protein sequence | MRIASWNING IRARRDSLLG WIDRKKPDIL VLEELKAQEK DIPEEIVAMQ GYKKYWNGSA FRKGYSGVGL LLKEGLCGEC RLEIPEFDCE NRTVVLHGSN LSVIGTYVPR GDGDAHYAVK LGYLSDLGTY ILELLREGRQ VIHTGDINVA HTDLDVHHSQ NKPGIVGLRP EERAAIDRHL EIGLHDIMRE RFPDKKDMFT WWPYWKGARE RNLGWRIDCF YLSKGLIGDV VDVRIDSAEK SSDHAPVILD IRSCAL
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