Gene Cphamn1_0123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0123 
Symbol 
ID6373767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp115029 
End bp115655 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content53% 
IMG OID642682637 
Productpeptidase M22 glycoprotease 
Protein accessionYP_001958584 
Protein GI189499114 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000799659 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00871269 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCGGCTG TCGGTCACGT GGGTGTTGTT GAAGAAACGG TTCATCAATG GCAGCGGACA 
GCCGAGTCTA TTATTCCATT GGCAGACCGG GTGCTTGCTG CTGCGGAAAT GGTTATGAGT
GACATTGATT TTCTTGCGCT CTCTCGAGGG CCCGGATCTT TTACCGCTTT GCGTATCGGT
ATGGCAACGG CAAAGGGGAT GGCATATGGG CTTGGACGTC CTCTCGTGAC CGTATCGACC
ATGGAGGCGT TTGCAGCTTC TGCCTGTGAA AAGGTCGGTT CCCGCTTTCT GGTACCGGTT
ATTCCCGCAA GGAAAGGTGA ATGGTACTAC GCCGTGTATC GTGCGAACGG GAAAGGGCCG
GAAGAGGTGG AAAAGACAGC ATTCGTTCAT GTTGACACTC TGAGAGAGAT TCTCGAGCGA
TACAGGGGGC GGTGCGCGGT TGTCGCAAAG GACATCGGCC AGCTGGAAGA GGTGTGCAGA
AGCGCAGGAG TGGATGCCGT AAAGGCTGAT TTTTTTACGG CTGTTTCGTT GATTCCGATC
GCGGAAAAGA CGTATATGGC CGGCGAGGTT CCTTCTCTTG AAATGGTTAC CCCCGATTAT
CTGCAGCAAT TCCGTTCAAA CAGGTAA
 
Protein sequence
MAAVGHVGVV EETVHQWQRT AESIIPLADR VLAAAEMVMS DIDFLALSRG PGSFTALRIG 
MATAKGMAYG LGRPLVTVST MEAFAASACE KVGSRFLVPV IPARKGEWYY AVYRANGKGP
EEVEKTAFVH VDTLREILER YRGRCAVVAK DIGQLEEVCR SAGVDAVKAD FFTAVSLIPI
AEKTYMAGEV PSLEMVTPDY LQQFRSNR