| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0122 |
|---|
| Symbol | |
|---|
| ID | 6373766 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 114364 |
|---|
| End bp | 114840 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642682636 |
|---|
| Product | protein of unknown function UPF0079 |
|---|
| Protein accession | YP_001958583 |
|---|
| Protein GI | 189499113 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0802] Predicted ATPase or kinase |
|---|
| TIGRFAM ID | [TIGR00150] ATPase, YjeE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.000147481 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00840651 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGTTTGTTT TTTTTGACTT TTTACTTTTG AATTTTGACT TTCTTCCCAT GAAAGAATTC
TACTCCCGTT CGGTTGAGGA GACCCGAGAA TACGCCAGGC AGTTCGCTGC CGGCTTGCAA
CCGGGTGATG TCGTTTTTTT GTGTGGCAAT CTGGGCGCGG GCAAGACCGA GTTCATGCGC
GGGATCGCAC AGGTATTCAA ATGCGATGAC CAGTTGTCGA GCCCTTCCTT TTCAATTTTC
AATATCTATA ACGGCAGCCT GAGAGGCGAG CCGGTGAAGC TACAGCATTT CGATCTCTAC
CGTATTGAGA CTCCTGAAGA GCTCGACGTG CTTGGATTCG GGGAGTATAT CGACGGACAA
ACCATATCGG TTGTTGAGTG GGGTGAAAAA TTTCCCGACG AACTTCCCGG TAACGCAAAA
AAAGTATTTA TTGAAGCCGT CGGGGAAGAC GAGAGAAGAA TCGTTCTGGA GCGTTGA
|
|---|
| Protein sequence | MFVFFDFLLL NFDFLPMKEF YSRSVEETRE YARQFAAGLQ PGDVVFLCGN LGAGKTEFMR
GIAQVFKCDD QLSSPSFSIF NIYNGSLRGE PVKLQHFDLY RIETPEELDV LGFGEYIDGQ
TISVVEWGEK FPDELPGNAK KVFIEAVGED ERRIVLER
|
|---|
| |