| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0103 |
|---|
| Symbol | |
|---|
| ID | 6373747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 98083 |
|---|
| End bp | 99021 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 642682620 |
|---|
| Product | domain of unknown function DUF1731 |
|---|
| Protein accession | YP_001958567 |
|---|
| Protein GI | 189499097 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1090] Predicted nucleoside-diphosphate sugar epimerase |
|---|
| TIGRFAM ID | [TIGR01777] conserved hypothetical protein TIGR01777 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAAGATC ATATCGTTAT TACCGGTGCT ACAGGTGTGA TTGGCTCTGA ACTTGCGCAT
CAGCTGATCG CCGAAGGTGA GCAAGTGGTT GTTTTTTCGC GTTCTCCTAA TAGTGCTTCG
TCCAAGGTTC CCGGTGCGGC GGCATATGCC GCCTGGAATT ATGACAATAG CGATGGAGAA
TGGACCCGGT ATATCAGCGG AGCAAAAGCG GTGATACATC TGGCGGGAAA ACCTCTTCTC
GATACGCGCT GGACAGAGGA GCATAAGGTT GAGTGCTATA ATTCGAGAGT CGTGGGAACG
AAAAATCTTG TCAAGGCTAT CCAGGGGGCC GACATAAAAC CGAAATCCCT GATTTCCGCA
TCTGCCATAG GATATTACGG TTCTTACGAA AACTGTGGTG ACTCGCCTGA CCTTGATGAA
GCCGCGGCGG AAGGTGAAGA TTTTCTGGCT AAGATCTGTA TCGATTGGGA GAAGGAGGCT
GAGAATGTGC CGGAAGGTGT GCGGCTTGTG CTGTTAAGAA CGGGTATTGT GCTTTCAACC
AAAGGAGGAA TGCTTCAGCA GATGCTTCTG CCTTTTAACC TTTTCCTTGG CGGGCCTGTC
GGTTCAGGTA AACAGTGTAT TTCCTGGATT CACGTAGATG ATGAAGTCGC GATTATCCGC
AAGGCTGTAG AGGAGTCTTC TTATAAGGGG CCGATAAATC TTGTTGCTCC GCATCCGGTT
TCCATGAAAG AGTTCGCGGG AGATCTTGGA TCTGTGCTTT CAAGACCGTC TCTGATTCCT
GTCCCGAAGT TTGCCTTGCA GATTCTGATG GGGGAAGGGG CTGAATACGC AAGTAAAGGG
GGCAAGGTCG TTCCGGGGTT TTTGAAGGAG CAGAACTATC GCTTTACGCA TCCGTCTCTT
CGTGAAGCGC TGGCTGATCT TGTTGAACAT AACAAGTAG
|
|---|
| Protein sequence | MEDHIVITGA TGVIGSELAH QLIAEGEQVV VFSRSPNSAS SKVPGAAAYA AWNYDNSDGE
WTRYISGAKA VIHLAGKPLL DTRWTEEHKV ECYNSRVVGT KNLVKAIQGA DIKPKSLISA
SAIGYYGSYE NCGDSPDLDE AAAEGEDFLA KICIDWEKEA ENVPEGVRLV LLRTGIVLST
KGGMLQQMLL PFNLFLGGPV GSGKQCISWI HVDDEVAIIR KAVEESSYKG PINLVAPHPV
SMKEFAGDLG SVLSRPSLIP VPKFALQILM GEGAEYASKG GKVVPGFLKE QNYRFTHPSL
REALADLVEH NK
|
|---|
| |