Gene Cphamn1_0102 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0102 
Symbol 
ID6373746 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp96005 
End bp97852 
Gene Length1848 bp 
Protein Length615 aa 
Translation table11 
GC content51% 
IMG OID642682619 
Productglucosamine--fructose-6-phosphate aminotransferase 
Protein accessionYP_001958566 
Protein GI189499096 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains 
TIGRFAM ID[TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTGGAA TAGTTGGATA TATCGGCCAT CGTGATGCGG CGGGGTTGCT CTTGAACGGA 
CTTCGGCGTC TGGAATACCG GGGCTACGAT TCTGCGGGAA TTGCTGTTCT GAACGGCGGT
TTGAAGATGT TCAAGCAAAA AGGAAGCGTC GATGAGCTGA GAAGATCATT GCATGATGCA
GGAAATCCTC TCAACGGGGC TACGATAGGT ATCGGTCATA CCCGGTGGGC GACGCACGGC
GACCCCAGCG ACCGGAATGC ACACCCTCAT GTGAGCAGTG ACGGCCGGAT AGCGCTTATA
CATAACGGGA TCATTGAGAA CTATCCGGCT ATTAAAAAAG AGCTGATTTC AAAAGGGGTT
CATTTCAGCA GCGATACCGA TTCAGAAGTG CTTGTTCATC TTATAGAAAG CATCTGGTCG
GATAATCCCG GGATGGCCCT GGAAGCTGCG GTCCGTTCTG CGCTCTATCA TGTGGAAGGA
GCATACGGGC TGTGTGTTAT CTCAGAGCGG GAGCCGGACA GCATTGTTGT CGCCCGTAAG
GGAAGCCCGC TGGTTATAGG TATCGGTGAA GGCGAGTACT ATATAGCATC TGATGCCGCT
CCCATTGTCG AACATACCAA AAAGGTTGTC TACCTCGCTG ATGGAGAAAT GGCTGTTGTT
ACAAGAAATG ACGGTTTTGC TATCAAGACA ATAGAGAACA TAGCCCGTGA AAAGCATGTA
AGTGAGCTTG AATTCGAACT CGCCGAGATT GAAAAAGGGG GGTTTGAGCA TTTTATGCTC
AAGGAGATTT TTGAGCAGCC AAAGGTGCTT CAGGATGTTA TGCGGGGACG GGTCAGGCTT
GATGAGGGTC AGGTTCGCCT GGGAGGTATA GAGGATTATC TCGATCGCCT GAAGCTATCC
AGCAGGGTGA TTATCTGCGC ATGCGGGACA AGCTGGCATG CGGGGTTGAT CGGGGAGTAC
CTGATTGAAG AGTTTGCCCG GATTCCCGTT GAAGTTGATT ATGCCTCGGA GTTTCGTTAC
CGCAATCCGG TGATTACCAG GGATGATGTG GTAATCGTTA TTTCGCAGTC GGGCGAGACC
GCCGATACGC TTGCCGCATT GCGCCTTGCA AGGGAGAAGG GGGCGTTGGT TATGGGGATC
TGTAATGTAG TTGGTTCAAC CATAGCCCGT GAAACACTCT GCGGGATTTA CACTCACGCC
GGTCCGGAGG TCGGTGTTGC GTCGACCAAG GCGTTCACCG CCCAGGTAAC GGTACTCTAT
CTTCTTGCGT TGACGCTCGG CAAGGGGCGT ACCATGTCTC GTAATGAATT GAAGCTCTAC
CTCAAAGAGC TTAACGGTAT TCCTGAAAAA GTGGAACGAA TTCTCAAGCA GAATGACCTT
ATTCTGGAAA TAGCTAAAAA CTATAAAGAT GCCGGAAATT TCCTCTACCT CGGGCGCGGG
TACAATTTCC CCGTAGCGCT TGAAGGGGCG TTGAAGCTCA AGGAGATTTC CTACATTCAT
GCCGAGGGGT ATCCGGCTGC AGAAATGAAG CACGGTCCTA TTGCGCTTAT TGACCAGGAT
ATGCCGGTTA TCTTTATCGC GACACGCGAT AACTCGTATG CCAAAGTATT GAGCAACATC
GAGGAGGTCA GAAGTCGCAA GGGCAAGGTG ATCGCTATTG CCAATCATGG CGATGACGAA
ATCGGCAGGC TTGCCGATCA TGTTATTTAT ATTCCTCCTG CATCAGCTCC GGTAACCCCG
CTGCTCTCAG TAATCCCCTT ACAACTGCTT TCTTATCACA TCGCGACGCT GAGGGGCTGC
AATGTTGACC GTCCGAGAAA CCTCGCTAAA TCGGTAACGG TTGAGTGA
 
Protein sequence
MCGIVGYIGH RDAAGLLLNG LRRLEYRGYD SAGIAVLNGG LKMFKQKGSV DELRRSLHDA 
GNPLNGATIG IGHTRWATHG DPSDRNAHPH VSSDGRIALI HNGIIENYPA IKKELISKGV
HFSSDTDSEV LVHLIESIWS DNPGMALEAA VRSALYHVEG AYGLCVISER EPDSIVVARK
GSPLVIGIGE GEYYIASDAA PIVEHTKKVV YLADGEMAVV TRNDGFAIKT IENIAREKHV
SELEFELAEI EKGGFEHFML KEIFEQPKVL QDVMRGRVRL DEGQVRLGGI EDYLDRLKLS
SRVIICACGT SWHAGLIGEY LIEEFARIPV EVDYASEFRY RNPVITRDDV VIVISQSGET
ADTLAALRLA REKGALVMGI CNVVGSTIAR ETLCGIYTHA GPEVGVASTK AFTAQVTVLY
LLALTLGKGR TMSRNELKLY LKELNGIPEK VERILKQNDL ILEIAKNYKD AGNFLYLGRG
YNFPVALEGA LKLKEISYIH AEGYPAAEMK HGPIALIDQD MPVIFIATRD NSYAKVLSNI
EEVRSRKGKV IAIANHGDDE IGRLADHVIY IPPASAPVTP LLSVIPLQLL SYHIATLRGC
NVDRPRNLAK SVTVE