Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0101 |
Symbol | |
ID | 6373745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | + |
Start bp | 95138 |
End bp | 95962 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 642682618 |
Product | orotidine 5'-phosphate decarboxylase |
Protein accession | YP_001958565 |
Protein GI | 189499095 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
TIGRFAM ID | [TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCAG CTCGAAACAA GGTCAATGAC CGGATTTCAA CCACGAAGTC TCTCTTGTGT GTCGGTCTTG ACAGCGATCA GAATAGGATT CCTGAACTGT ACCGGTCAAT GGAGCGTCCT GTTCTGGAGT TTAACCGCTC TGTGATCAAG GCGACAAAGG AACATGCGGT AGCGTATAAG ATAAATACCG CGTTTTATGA GGCAAGAGGC CTCGAAGGTA TTCAGGATAT GCAGGACACG CTGGACCTGC TTCCACCGGA CTGCCTCTCT ATCGCTGATG CAAAACGAGC CGATATCGGA AACACCAGCA GGAAATATGC GCAGGCTTTT TTTGAGCACT GGGATTTCGA CGCGCTTACC GTAGCTCCAT ATATGGGATT CGATTCTCTT GAGCCGTTTT TCGCATATGA TCAGAAACTG ATTTTTGTAC TGTGCCTGAC TTCCAATTCC GGCTCCGCCG ATTTTGAGGA AAAACAGTTG CAGTCCGGGG AAACCCTCTA TGAGAGTGTT CTGGCCAGAG TGCAGGAGTG GGACAGGAAC GGCAATGCGG GAGTTGTTAT AGGAGCAACG AAAAGCAGTC AGTTGAGGGA TCTTCGCAGG GCGGCGCCGG GACTGTTTTT TCTTATCCCC GGTGTCGGCG CTCAGGGCGG TTCACTCAGG GATTCAGCTA CTCTCGGAGT GGATGAAAAC CTCCAGGGTG CGTTGATAAA TGTCAGTAGG GGGATTATTT ATCCTGACGG GAACTTTGAT TCGGTTGACG TGTTCGAGGA CTCAGTGAGC CGGAAAGCGG AGGCGCTTCA TGATGAGATG CTGAAAATTT TTTGA
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Protein sequence | MNAARNKVND RISTTKSLLC VGLDSDQNRI PELYRSMERP VLEFNRSVIK ATKEHAVAYK INTAFYEARG LEGIQDMQDT LDLLPPDCLS IADAKRADIG NTSRKYAQAF FEHWDFDALT VAPYMGFDSL EPFFAYDQKL IFVLCLTSNS GSADFEEKQL QSGETLYESV LARVQEWDRN GNAGVVIGAT KSSQLRDLRR AAPGLFFLIP GVGAQGGSLR DSATLGVDEN LQGALINVSR GIIYPDGNFD SVDVFEDSVS RKAEALHDEM LKIF
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