| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0098 |
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| Symbol | |
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| ID | 6373741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides BS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010831 |
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| Strand | - |
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| Start bp | 90804 |
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| End bp | 91952 |
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| Gene Length | 1149 bp |
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| Protein Length | 382 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 642682614 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_001958562 |
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| Protein GI | 189499092 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00415904 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCAC TATCTATCCT TGGCAGTACC GGATCAATCG GATTAAGCAC GCTTGATGTT
GTCCGTCAAC ACCCGGAGAA ATTTAACGTA ACCGGTCTGG CCGAAGGCCA TGATATCAAT
CTGCTTGCCG AACAGATCAA GGAGTTCCGA CCGGACATTG TCTCTGTGAG GGATAAAGCA
TCTGCAGGAC TCCTGCGTGA ACAGCTCGGC TCCGAAAAAC CTGAAATACT CTGGGGCATT
GAGGGCGCTG CCGCTGTTGG CGCTGCTGAA GGCTCGGAAA TGGTTGTCTC GGCTATTGTC
GGAGCGGCAG GGCTTGTGCC CACAGTGAGC GCAATCAAGG CGGGTAAGGA CATCGCCCTT
GCAAACAAGG AAACGCTGGT TGTCGCAGGA CAGCTTGTCT CGGATCTTGT GAAAGAACAT
AAGGTGACGC TTCTGCCTGT CGATAGTGAA CATTCAGCAA TTTTTCAATC ACTCTCCGGC
CACAGAAAAG AGGACATCGA GCGTATCATC CTGACCGCTT CAGGAGGACC TTTCAGACAT
ACGTCCGCCG AAGACCTTCG TCATGTCGGT CCTGAAAAAG CCCTGAAACA TCCCCAATGG
ACGATGGGAG CGAAAATAAC CATCGATTCC GCAACGCTCA TGAACAAGGG GCTGGAAGTT
ATCGAGGCCC ACTGGCTGTT CGATATGCCG GCAGACAAAA TAGGTGTTGT CGTTCATCCG
CAAAGCATTA TTCACTCTAT GGTAGAGTAT ATCGACGGCT GCGTTATGGC CCAGCTCGGG
GCGCCCGACA TGCGGGCACC GATAGCCTAC GCACTGGCAT GGCCTGAACG GTGCGAAAGC
GGCATCAAAA AACTTGACCT GACACAGATA GGAACCTTGA CTTTTGAGCA ACCTGACATG
GAAAGGTTCC CCGCGCTTCG CCTGGCGTTT GACGCACTCA AAGCCGGCCA GACGTTTCCT
GCCGTGCTGA ACGCGGCCAA CGAAATTGCC GTCGCCGCTT TCCTGGACAA AAAAATAGGT
TTTACCGATA TCCCTGCTAT TGCAGACAGA ACCATGCAGG CTCACGATCC TTACACTCCT
TCCGGTCTTG ATGAATATCT TGCCGCTGAC AGGTGGGCCC GTGATACCGC GAAAACAATG
ACGAATTAA
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| Protein sequence | MKSLSILGST GSIGLSTLDV VRQHPEKFNV TGLAEGHDIN LLAEQIKEFR PDIVSVRDKA
SAGLLREQLG SEKPEILWGI EGAAAVGAAE GSEMVVSAIV GAAGLVPTVS AIKAGKDIAL
ANKETLVVAG QLVSDLVKEH KVTLLPVDSE HSAIFQSLSG HRKEDIERII LTASGGPFRH
TSAEDLRHVG PEKALKHPQW TMGAKITIDS ATLMNKGLEV IEAHWLFDMP ADKIGVVVHP
QSIIHSMVEY IDGCVMAQLG APDMRAPIAY ALAWPERCES GIKKLDLTQI GTLTFEQPDM
ERFPALRLAF DALKAGQTFP AVLNAANEIA VAAFLDKKIG FTDIPAIADR TMQAHDPYTP
SGLDEYLAAD RWARDTAKTM TN
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