Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0087 |
Symbol | |
ID | 6373730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 80701 |
End bp | 82158 |
Gene Length | 1458 bp |
Protein Length | 485 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 642682603 |
Product | cation transporter |
Protein accession | YP_001958551 |
Protein GI | 189499081 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0168] Trk-type K+ transport systems, membrane components |
TIGRFAM ID | [TIGR00933] potassium uptake protein, TrkH family |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTTTC CAGCGATATC TCACGTTCTG GGCGCTCTTC TCATGTTTAT CGGCAGCACC ATGCTCCTGC CCCTTGCCTG CGCCCTGATA TACAATGACG GTGATGCTCT CTCTCTGTTG ATATCAATGG GGGTAACGGT CTCCATAGGA TTTCCCTTCT GGTGGAGTTT TCGAAAATAC CGTGACCTGA CGCTGAAAGA CGGCCTTTTC ATTGTCACGT TCGGCTGGAT CCTCGTCTCA TCTGTTTCAG CGTTGCCGTT CATGCTACAC GGTACCATAC CATCGTTTAC CGACGCTTTT TTTGAAATGA TGTCCGGCTA CACAACCACC GGTGCAACCA TTCTCGACGA CATCGAATCA GTCCCTCACG GCCTGCTTTT CTGGCGAAGC ACGACCCACC TCATCGGAGG CATGGGCTTT ATCATGGTCA CCATCATCAT TCTCCCCCTC CTCGGTATAG GAGGGATGCA GCTCTACAAG GCGGAAGCCG ATCCCGGTCA GGTCATAACC GGCGAAAAGT TTCTCCCTCG CGTCAAGCAG ACCGCCGTGT GGCTCTGGGG AATCTACCTT GCCCTGATTC TCATCCAGTC ACTCCTGCTC TGGATAGGAG GCATGCCTGT TTTCGACTCT CTCTGTCACG CTTTCGGCAC GGTTTCCACT TCCGGTTACT CGACAAAGAA CAGCAGTATC GGCTATTACG ACAGCGCATG GATCGACTGG ATAACCATCA TTTTCATGTT TCTCGGGGGC ATGGCCTTCA TGATGCATTA CCATATCCTG AAAAAGGACT GGGAACCCGT CCGTAACAAC ACGGAAATAC GCTGGTACAT CGGTTTTGTC GTGTTTATCA GCTTGCTTGC CACACTGATT CTCTGGGCTA CCGGAAGCTA TAGCGGATTC TTCGATTCCA TACGCCATGC AACCTTCCAG GTTGTTTCAA TCCTGACAAC AACCGGATTT ACCACCGCAG ACTATGAGCT TTGGCCTCAG TCTGCACAGA TGCTTCTCAT GATCGCCTGC TTCATCGGTG CGTGTGCGGG CTCGACCACC AGCGGCATCA AGGTGGTGCA CTACGAAATC ATCTGCAAAT ACCTCTACGC CAACGGCAGG AAGTTCCTGC AGCCTTTAGC CGTAGTGCCG ATAAAGATCA ACCAGAAAAA TGTAGCCTCT TCCGTCGTAA CACTTGCAGT CAGTTACTTT ATTCTCAACA TCTTTATGAT CTTTGTGGGC AGTGCGATCA TGACCCTGAT CGACGACATG GATTTCTTCA GCTCCATGAG TGCGGTTATC TCTGCGCTTT TCAACATAGG GCCCGCCTTT GGAGAAGTTG GCCCGACGCA CACCTTTTCC CATGTCTCAA CCGCAGGCAA ATGGTTTCTT TCCTTCAATA TGCTTACCGG ACGCCTTGAG ATGTTCACCG TCATGGTGAT GTTCTACCCG TCCTTCTGGA AAAAGTAA
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Protein sequence | MNFPAISHVL GALLMFIGST MLLPLACALI YNDGDALSLL ISMGVTVSIG FPFWWSFRKY RDLTLKDGLF IVTFGWILVS SVSALPFMLH GTIPSFTDAF FEMMSGYTTT GATILDDIES VPHGLLFWRS TTHLIGGMGF IMVTIIILPL LGIGGMQLYK AEADPGQVIT GEKFLPRVKQ TAVWLWGIYL ALILIQSLLL WIGGMPVFDS LCHAFGTVST SGYSTKNSSI GYYDSAWIDW ITIIFMFLGG MAFMMHYHIL KKDWEPVRNN TEIRWYIGFV VFISLLATLI LWATGSYSGF FDSIRHATFQ VVSILTTTGF TTADYELWPQ SAQMLLMIAC FIGACAGSTT SGIKVVHYEI ICKYLYANGR KFLQPLAVVP IKINQKNVAS SVVTLAVSYF ILNIFMIFVG SAIMTLIDDM DFFSSMSAVI SALFNIGPAF GEVGPTHTFS HVSTAGKWFL SFNMLTGRLE MFTVMVMFYP SFWKK
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