Gene Cphamn1_0058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0058 
Symbol 
ID6373701 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp57715 
End bp58161 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content48% 
IMG OID642682579 
ProductPilT protein domain protein 
Protein accessionYP_001958527 
Protein GI189499057 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTTT ACATGCTTGA CACAAACATT GCCGGTCATG TCATCAAGGG AGACATACCT 
GCGATTCGTG AAAAGCTGGC ATCCGTCCCG ATGCAACATG TCCTCATCTC ATCAGTCACT
CAGGCTGAAT TGCTTTACGG GCTGGCGAAA CGCTCCTATC CCAAAGGATT GTCCGCGCGA
GTACACGAGT TTCTCATTCG TGTCGACATC CTTCCCTGGA ACCATGAAGT TGTAACGGTT
TACGGCGATC TCAGAGCAAG ATGCGAGGCC TCAGGCATAT CACTATCCCC CCTCGACATG
ATGATCGCCT CTCACGCAAA AGCCGCTGAC GCTGTTCTCG TCACAAGAGA CAGAGCATTC
AGTCGAGTTC CTGATGGATT GAGGATTGAA ACTGGTAAGG AAATTGAGGC TATTATGTAT
GTACACTTTT TTCACTATTT TGAATAA
 
Protein sequence
MPLYMLDTNI AGHVIKGDIP AIREKLASVP MQHVLISSVT QAELLYGLAK RSYPKGLSAR 
VHEFLIRVDI LPWNHEVVTV YGDLRARCEA SGISLSPLDM MIASHAKAAD AVLVTRDRAF
SRVPDGLRIE TGKEIEAIMY VHFFHYFE