Gene Cphamn1_0029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0029 
Symbol 
ID6373671 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp34128 
End bp35078 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content52% 
IMG OID642682550 
ProductMuramoyltetrapeptide carboxypeptidase 
Protein accessionYP_001958499 
Protein GI189499029 
COG category[V] Defense mechanisms 
COG ID[COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0259405 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.953686 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAACCC TGATTCCCAA AGCACTCCGG CATGGTGACA CCATCGGGCT CATCTCACCA 
TCGTCTCCTT CTCCCGACCA CGAAAAAGTC GGTCACGCGG TCTCTTATCT TGAAAAACTC
GGCTACCGGG TAAAGCCTGC TGAGCACTTC AACTCCAGAA CAGAAAACCG CCTGGAGCTT
GACCGGCGAA AACTCAGCGA CCTCCATGAG ATGTTTGCCG ATACATCCGT GAAGGCGATT
TTCTGCCTGA GAGGAGGATC AGGAGCCACA AGACTTCTGC AGGATCTCGA TTACGAGCTG
GTCTCACGAA ACCCGAAAAT CCTCGCAGGG TATTCTGATA TCACAGCTCT CTCGATAGGG
CTCTTCGCCA AAACCGGCCT GCTGACCTTT TCAGGCCCGA TGCTTGCGAC AGAACTTCAC
AACCCCAGCG GTTACACAGA AGAGAATTTC TGGAAAATAC TTGAATCGAC ATCGTCTGTT
CACCAGATCA TCAACCATCC TGACCATCCC ATTAACGTCT ACAGGGAAGG CTCTGCCACA
GGAACGCTGC TGGCAGGCAA TCTGACTGTT TTATCCTGCC TGGTAGGCAC CCCCTACCTG
CCTCCCCTGG ATGGCACTCT GCCGATTTTT GAGGATATCA ATGAAGAGCC TTACAGGATC
GACCGGCTCC TTTCCCACTT CCACAATGCA GGTCTTCTCA GCAGCTGCTC AGGCATTCTG
TTCGGCCAAT TCAGCAAAGA GATCATAACA TTTGATACGC AGCATCCTCT TCTTGATATT
CTGCGCTACT ACACAGAGAA AACCTCTCCG AATGTTCCTG TTGTCGCCGG GCTCTCCTAC
GGACATATCG ACGACCTGCT CACACTGCCC GTCGGTGCAA CCTGCACGCT AAACGCCAGC
CACGAAAGAA TTTCATTGAC GACGTCCCCC GCTGTATGCA GTGACCAGTG A
 
Protein sequence
MRTLIPKALR HGDTIGLISP SSPSPDHEKV GHAVSYLEKL GYRVKPAEHF NSRTENRLEL 
DRRKLSDLHE MFADTSVKAI FCLRGGSGAT RLLQDLDYEL VSRNPKILAG YSDITALSIG
LFAKTGLLTF SGPMLATELH NPSGYTEENF WKILESTSSV HQIINHPDHP INVYREGSAT
GTLLAGNLTV LSCLVGTPYL PPLDGTLPIF EDINEEPYRI DRLLSHFHNA GLLSSCSGIL
FGQFSKEIIT FDTQHPLLDI LRYYTEKTSP NVPVVAGLSY GHIDDLLTLP VGATCTLNAS
HERISLTTSP AVCSDQ