Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cphamn1_0029 |
Symbol | |
ID | 6373671 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides BS1 |
Kingdom | Bacteria |
Replicon accession | NC_010831 |
Strand | - |
Start bp | 34128 |
End bp | 35078 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 642682550 |
Product | Muramoyltetrapeptide carboxypeptidase |
Protein accession | YP_001958499 |
Protein GI | 189499029 |
COG category | [V] Defense mechanisms |
COG ID | [COG1619] Uncharacterized proteins, homologs of microcin C7 resistance protein MccF |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0259405 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.953686 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAACCC TGATTCCCAA AGCACTCCGG CATGGTGACA CCATCGGGCT CATCTCACCA TCGTCTCCTT CTCCCGACCA CGAAAAAGTC GGTCACGCGG TCTCTTATCT TGAAAAACTC GGCTACCGGG TAAAGCCTGC TGAGCACTTC AACTCCAGAA CAGAAAACCG CCTGGAGCTT GACCGGCGAA AACTCAGCGA CCTCCATGAG ATGTTTGCCG ATACATCCGT GAAGGCGATT TTCTGCCTGA GAGGAGGATC AGGAGCCACA AGACTTCTGC AGGATCTCGA TTACGAGCTG GTCTCACGAA ACCCGAAAAT CCTCGCAGGG TATTCTGATA TCACAGCTCT CTCGATAGGG CTCTTCGCCA AAACCGGCCT GCTGACCTTT TCAGGCCCGA TGCTTGCGAC AGAACTTCAC AACCCCAGCG GTTACACAGA AGAGAATTTC TGGAAAATAC TTGAATCGAC ATCGTCTGTT CACCAGATCA TCAACCATCC TGACCATCCC ATTAACGTCT ACAGGGAAGG CTCTGCCACA GGAACGCTGC TGGCAGGCAA TCTGACTGTT TTATCCTGCC TGGTAGGCAC CCCCTACCTG CCTCCCCTGG ATGGCACTCT GCCGATTTTT GAGGATATCA ATGAAGAGCC TTACAGGATC GACCGGCTCC TTTCCCACTT CCACAATGCA GGTCTTCTCA GCAGCTGCTC AGGCATTCTG TTCGGCCAAT TCAGCAAAGA GATCATAACA TTTGATACGC AGCATCCTCT TCTTGATATT CTGCGCTACT ACACAGAGAA AACCTCTCCG AATGTTCCTG TTGTCGCCGG GCTCTCCTAC GGACATATCG ACGACCTGCT CACACTGCCC GTCGGTGCAA CCTGCACGCT AAACGCCAGC CACGAAAGAA TTTCATTGAC GACGTCCCCC GCTGTATGCA GTGACCAGTG A
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Protein sequence | MRTLIPKALR HGDTIGLISP SSPSPDHEKV GHAVSYLEKL GYRVKPAEHF NSRTENRLEL DRRKLSDLHE MFADTSVKAI FCLRGGSGAT RLLQDLDYEL VSRNPKILAG YSDITALSIG LFAKTGLLTF SGPMLATELH NPSGYTEENF WKILESTSSV HQIINHPDHP INVYREGSAT GTLLAGNLTV LSCLVGTPYL PPLDGTLPIF EDINEEPYRI DRLLSHFHNA GLLSSCSGIL FGQFSKEIIT FDTQHPLLDI LRYYTEKTSP NVPVVAGLSY GHIDDLLTLP VGATCTLNAS HERISLTTSP AVCSDQ
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