Gene Cphamn1_0027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCphamn1_0027 
Symbol 
ID6373669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides BS1 
KingdomBacteria 
Replicon accessionNC_010831 
Strand
Start bp31718 
End bp33085 
Gene Length1368 bp 
Protein Length455 aa 
Translation table11 
GC content52% 
IMG OID642682548 
Productaminotransferase class V 
Protein accessionYP_001958497 
Protein GI189499027 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0520] Selenocysteine lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTAATT TCTCATCTGG CGGTGACGAA GGAGTGTTCC TTCCGGAAAG AGAGGAGGCG 
TATTTTTCAG GGTTCGCCAG AATGTTCAAA ATCTCCAATA TCGACAGATA TTTTTTGCCA
ACGCAGAAAG GCTCGATGCC GATTCCCGTC CTGAAGAACT ACAAGAAAGG CCTCGACAGG
ATCGCCAAAG ATCCTCGCAG GGTATTTCTT GAAAAAACAG AGGTGACGAG AGAAAAAATT
GCCAAGGGCT ACGGGGCAAG AGCAGATGAG ATTGCCATAT CCCGAAATAC AACTGATGCG
ATCAGCCAGG TTCTCTACGG AATTGACTGG CGCAGGGACG AAGAAATTCT CTGTTCAACG
CTGGAGTATC CCAACTGTAT CGCGACCATT CGTCGGGTAG CCTGCCGGTT TGGTTTGACT
ATCCGGCAGT TTGGTGTTCC GTCCCGGCAT GATACCCACG CAGAAGAGAT CGTTGAGTCT
GCAAGGAGGG GGATCGTGCC CGGGAAGACA AAAGTGATGT TTTTTTCCGC TCCGGCTCAG
CCTAACGGGA TGATGCTCCC GTTTCGCAGG CTCGCGCGAC TTGCTCAGCA CTATGGAATT
ATAACTGTTG TCGATGGGGC TCATTACGGA GGGATGTTCA ATCCCCGGCT TGACGACACC
GGAATAGATT TCTGGGGGAT ATCCGGTTAT AAATGGCAGT GCGGTCCCGG AGGAACCGGA
ATTCTGTATG TTCGAAACGC TCTCCTTGAA TCCAACAATA CTCCTCTTCC CCGTTTCAAT
CTGGTTCGTT CGGCGGATCT CCATGCACCT ATCGATGGTT CAAGGCCTTT GGATTTCGAT
ATCGGGGCAG CATTGAGTCA CTACGGTTTT CCTGAATCAG CTGACCTGCG AGCCCTTGGG
GAGGCTTGCG AGATCTGGGA CCGGGCCGGA AGGGCAAGAA TCGAGCGGTA TATTCTCTGG
CTTGCCGACT ATGCTCGTGA GAAACTTGTC GCTGTTTTCG GAGAACACGC TCTTCTGCAG
GCCTGCAAGG ACGAAGAATT GAAATCAGGC CTTGTCGCGT TCAACCCTTT TCCCGAGAAG
GAGCAGCGAC GGGATTTGCA ACTGGCCCAC AGGTTTAATG CCCGTTTATC CAGGAAGTAC
GGATATCGTC TTGGCTATGG TGGTATTGGT CTCAATGGAT TTACCCGGGA CCCTGAGCCT
GATGCCGGGC GTTTTTACGA AGGATGCGTT CCTAATCGAA ATGCGCTGAC CAACGAGCCC
GAGCCGGAGG ATATTCCTTT CAGGTTCGGT ACGCCCGTAT GGATAAACCG CAAGGATATT
GACAGGTTCA TAAAGGCGTG CAGAAAAACA CTGGATAGCG TGGCCTGA
 
Protein sequence
MFNFSSGGDE GVFLPEREEA YFSGFARMFK ISNIDRYFLP TQKGSMPIPV LKNYKKGLDR 
IAKDPRRVFL EKTEVTREKI AKGYGARADE IAISRNTTDA ISQVLYGIDW RRDEEILCST
LEYPNCIATI RRVACRFGLT IRQFGVPSRH DTHAEEIVES ARRGIVPGKT KVMFFSAPAQ
PNGMMLPFRR LARLAQHYGI ITVVDGAHYG GMFNPRLDDT GIDFWGISGY KWQCGPGGTG
ILYVRNALLE SNNTPLPRFN LVRSADLHAP IDGSRPLDFD IGAALSHYGF PESADLRALG
EACEIWDRAG RARIERYILW LADYAREKLV AVFGEHALLQ ACKDEELKSG LVAFNPFPEK
EQRRDLQLAH RFNARLSRKY GYRLGYGGIG LNGFTRDPEP DAGRFYEGCV PNRNALTNEP
EPEDIPFRFG TPVWINRKDI DRFIKACRKT LDSVA