| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphamn1_0014 |
|---|
| Symbol | |
|---|
| ID | 6373656 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides BS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010831 |
|---|
| Strand | + |
|---|
| Start bp | 17725 |
|---|
| End bp | 19047 |
|---|
| Gene Length | 1323 bp |
|---|
| Protein Length | 440 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 642682535 |
|---|
| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
|---|
| Protein accession | YP_001958484 |
|---|
| Protein GI | 189499014 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000051018 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTATGA AAAATCGTTT TTTAAGGTTA GTCGCTGTTG TTTTTATTAT GGTTGCCGCC
GGGTTTCAAC GTGCCGGTGC GGCAGTTGCC GACAGAATTG TTGCTGTTGT CGGTAACGAA
ATGATTATGC AGTCACAGGT TGATGAGCAG GCTATGATGG CCCGTCTTCA GTATACGGAG
GCCAAAAATG ACCCGTCGCT GAAAGCAGGT ATTCTCGAGA ACCTCGTTAC CAGAAAAATC
GTGCTGACCA AGGCCAGGAT TGACAGTATT CAGGTTGATG AGTCCGATAT CGAGAAGAGA
ACTGATGAAA GAATGAGGTT CCTTCGATCC AAATTCAGCT CTATTGAGGA GATGGAATCT
ACCTTTTCAA AGTCATATGC GGTAATCGAA AAGGAGATCA AAGACGATAT ACGTGATCAG
CAGTTGATCA ACAACCTCCG GAGACAGAAA ATGATGGGGG TGAACGTCAC CTATGAGGAG
GTTGAGGACT TCTATGGTGC AAACCGCGAT AAACTTCCGG TTGTGCCTGA GGCTGTTGAG
GTTTCCCAGG TCGTGATGTA TCCGAAGGTT ACTGCTGAAG CGAAAGCAAA GGCACGCGCA
GCCATTGAAG CAATGCAGCA GAGGTTGAGA TCAGGAGAGA ATTTCGCTGC TCTTGCCAGA
GAGTATTCCC AGGATCCCGG ATCTGCCCGT CTCGGCGGAG ATCTCGGTTA TTCCCGGCGT
GGGGAATTTG TAAAGAATTA CGAGAAGGTT GCATTCGGGC TTGAAGAAGG TGAGATCTCC
GGGATTGTTG AAACACGTTT TGGCTACCAT ATCATCCAGC TTCTGGATAA GGAGCAGGAC
GCGGTGCACA CGCGGCATAT TCTGATTGTT TTCGACAGAA GTACTCTCGA TGCTCCGGCG
GCAAAGGCTG CCCTTGAAAT GATCCGCAGT GATATCATCA GCGGAAAATC TGACTTTGCT
GAAATGGCCA GAGAGTATTC AGACGATCCT GTATCGTCCA AGTACGGAGG AGTGATCCGT
AACACTGAAA CCGGCGAGAC CAGATTTGCC GTTTCATCGC TTCGTGATCA GCTTAAAACC
GTTGTCAGAT CATTTAAAAA GGTTGGTGAT ATCAGCAGCG TCGTGCGGGT GGCTCCTGAA
TCAGGCGCGC CGTTCTATGC GATTTTTAAG CTGAACAGCA GGGAGCCTGC ACATAAACTC
GATTTGTCTT CGGATTATGC CAGGCTCGAA AAACTTGCCA TTGACGAGAA GCAGAACAGA
TTGTTCCAGG AATGGATCAA TGAGCTGCAG AAAGAGGTCT ATGTCAGGAT CTCAGACATC
TAA
|
|---|
| Protein sequence | MIMKNRFLRL VAVVFIMVAA GFQRAGAAVA DRIVAVVGNE MIMQSQVDEQ AMMARLQYTE
AKNDPSLKAG ILENLVTRKI VLTKARIDSI QVDESDIEKR TDERMRFLRS KFSSIEEMES
TFSKSYAVIE KEIKDDIRDQ QLINNLRRQK MMGVNVTYEE VEDFYGANRD KLPVVPEAVE
VSQVVMYPKV TAEAKAKARA AIEAMQQRLR SGENFAALAR EYSQDPGSAR LGGDLGYSRR
GEFVKNYEKV AFGLEEGEIS GIVETRFGYH IIQLLDKEQD AVHTRHILIV FDRSTLDAPA
AKAALEMIRS DIISGKSDFA EMAREYSDDP VSSKYGGVIR NTETGETRFA VSSLRDQLKT
VVRSFKKVGD ISSVVRVAPE SGAPFYAIFK LNSREPAHKL DLSSDYARLE KLAIDEKQNR
LFQEWINELQ KEVYVRISDI
|
|---|
| |