| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_1422 |
|---|
| Symbol | |
|---|
| ID | 6377524 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010830 |
|---|
| Strand | - |
|---|
| Start bp | 1825284 |
|---|
| End bp | 1826984 |
|---|
| Gene Length | 1701 bp |
|---|
| Protein Length | 566 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 642682493 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001958443 |
|---|
| Protein GI | 189502726 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
|---|
| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.432451 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAAA GATGGGTGTT TCAAACTATG CCAGAGCCTA CTGTGGTTGC ATCATTAGCC
AATGCTATTG GCGTAGATAG CTCTATTGCT GCTTTATTGG TACAAAAGGG AGTAACTGAT
TTTAATCAGG CAAAAGATTA TTTTAGACCT TCGTTAGCCG ATCTGCACGA TCCGTTTATT
ATGAAGGATA TGGATAAGGC AGTAGGCCGT TTACTGCGAG CTATTGAGAA CCAAGAAGAA
ATATTAATCT ATGGCGACTA TGATGTGGAT GGAGTTACAT CAGTATCGTT GGTATATGGC
TTTTTGAAGC AATATCATAG TAAGCTACAA TTCTATATTC CAGATAGATA TAAAGAAGGT
TATGGGGTTT CTAAGCAAGC TATCAACTGG GCTATTGAGA CAGGTATTTC CCTAATTATA
ACATTAGACT GTGGTATAAA AGCCACAGAA TGTATTCAAC AAGCCCAGAT AGCAGGAATT
GATGTAATTG TATGTGATCA CCATGAACCA GGTGAAGGCC TGCCACCTGC CTATGCAATT
TTAGATCCTA AACAAAAAAC ATGTCCTTAT CCTTTTAAAG AGCTTTCTGG TTGTGGGGTT
GGTTTTAAGT TACTTCAAGC TTTTGTATTA AAGCAAAACA TTTCATTAGA CATCCTCTAT
CGATACCTGG ACTTAGTAGC TATTAGCATT GCCTGCGACT TAGTTCCACT CACGGACGAA
AATAGAATAC TTGCTTACCA TGGACTAAAG CGCTTAAATA ATAGTCCTTC ATTTGGCATA
CAAGCTATTA TACAAGTTGC TAATTTACCC TGGACATTAG GAATTTCACA ATTGGTTTTT
GGTTTAGGGC CTCGCCTTAA TGCAGCAGGC AGGGTGGACC ATGGTAGCTT AGCTGTAAAT
TTACTTTTGG CAGAAGATTC AGTGACTGCT AGCTCGCTAG CACGTCAGAT TGAAGACAAA
AATGGTTTTA GAAGATACTT AGACAGTACT ATTACAGCAG AAGCACTTCA GTTGATGAAA
GCTAGCGATG CAAGTTTAAT AGCTAAAACT ACGGTGCTTT TTAAAGAAGA CTGGCACAAG
GGAGTAATTG GTATTGTTGC TTCTAGATGT ATAGAACATT ATTACCGTCC TACCATCATT
CTTACAGCTT CTGGTAATAA GGCTACAGGT TCTGCACGTT CTGTGGCAGG CTATAATATA
TATGAGGCCA TTACCGAATG TGCTGAGCTA TTGGAACAAT ATGGAGGGCA TGCCCATGCA
GCAGGCCTTA CATTACCTTT AGAAAATATT ATATCTTTTC AAGAACGTTT TGAGCAAGTT
GTCTCTAGCA CTATTTCGCA AGAATTGCTT ATTCCTGTTC AAAAAATAGA TTTGTTGCTG
CCGCTTGAAA AGGTTACCAA TAAGTTTTAT AATATTCTTA ACCAGATGGC TCCTTTTGGT
AATGGTAATA TGAGGCCTGT ATTTGCAACA GAGTTAGTGA TAGCTACTAA ATATAGAATT
CTTAAAGAAA ATCATTTAAA ACTAACGGTA CAAGAACCTG CTTCAGGCAT CTGTATAGAC
GCTATTGGTT TTGGATTAGC AAAATATGCC CATTTGGTGT GTGACCGTAA GCCATTTAAG
ATAGCTTATA CCATAGAGAG AAATAATTAC CAAGGGCAAG TAAATTTACA ACTTAATATT
AAAGGTTTAC AGCCAATATA G
|
|---|
| Protein sequence | MDKRWVFQTM PEPTVVASLA NAIGVDSSIA ALLVQKGVTD FNQAKDYFRP SLADLHDPFI
MKDMDKAVGR LLRAIENQEE ILIYGDYDVD GVTSVSLVYG FLKQYHSKLQ FYIPDRYKEG
YGVSKQAINW AIETGISLII TLDCGIKATE CIQQAQIAGI DVIVCDHHEP GEGLPPAYAI
LDPKQKTCPY PFKELSGCGV GFKLLQAFVL KQNISLDILY RYLDLVAISI ACDLVPLTDE
NRILAYHGLK RLNNSPSFGI QAIIQVANLP WTLGISQLVF GLGPRLNAAG RVDHGSLAVN
LLLAEDSVTA SSLARQIEDK NGFRRYLDST ITAEALQLMK ASDASLIAKT TVLFKEDWHK
GVIGIVASRC IEHYYRPTII LTASGNKATG SARSVAGYNI YEAITECAEL LEQYGGHAHA
AGLTLPLENI ISFQERFEQV VSSTISQELL IPVQKIDLLL PLEKVTNKFY NILNQMAPFG
NGNMRPVFAT ELVIATKYRI LKENHLKLTV QEPASGICID AIGFGLAKYA HLVCDRKPFK
IAYTIERNNY QGQVNLQLNI KGLQPI
|
|---|
| |