Gene Aasi_1421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_1421 
Symbol 
ID6377523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp1824497 
End bp1825228 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content38% 
IMG OID642682492 
Producthypothetical protein 
Protein accessionYP_001958442 
Protein GI189502725 
COG category[R] General function prediction only 
COG ID[COG1137] ABC-type (unclassified) transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.872796 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGCTTA GAGCTGAAAA CCTTGTTAAA CAATATAGAA AACGACTAGT AGTAAATCAT 
GCTTATGCTG CAGTATCTCA AGGAGAAATT GTAGGACTTT TAGGACCCAA TGGCGCTGGG
AAGACTACTA CCTTTTATAT GTTAGTAGGC CTTGTAAAGC CTGATGCAGG GGAAGTATAC
TTGGATGATC AACCCATTAC TAAGCTGCCT ATGTATAAAA GAGCACAGTT AGGAATTAGT
TACCTTCCAC AAGAAGCTTC TATATTTAGA AATTTAACGG TAGAAGAAAA TCTGATGGCC
ATTTTAGAAC ATACTAATCT TTCTCCTCAA GAAAGAAAAG AAAAAATGGA ATCTCTACTC
GAAGAGTTTA GCATTACCCA CATTAGAAAA AATCAAGGAA AAGTACTTTC AGGAGGTGAG
CGTAGAAGAA CAGAAATAGC TAGAGCCCTA ACGATTGATC CAAAATTTGT GCTTTTGGAT
GAACCTTTTG CTGGGGTAGA TCCGATTGCT GTAGAAGAAA TACAGCATCT AGTTGCCAAA
CTCAAAGATA AAAATATTGG CATACTAATT ACCGATCATA ACGTAAATGA AACGCTTTCT
ATTACAGACC GGGCTTATCT GATGTTTGAA GGTAAACTTC TTAAATCTGG TACAGCCGAA
GAGCTAGCAG AAGACGAACA GGTGCGTAGG GTATATTTGG GTAAACACTT TGAACTCAAG
CGTAAGTTTT AA
 
Protein sequence
MELRAENLVK QYRKRLVVNH AYAAVSQGEI VGLLGPNGAG KTTTFYMLVG LVKPDAGEVY 
LDDQPITKLP MYKRAQLGIS YLPQEASIFR NLTVEENLMA ILEHTNLSPQ ERKEKMESLL
EEFSITHIRK NQGKVLSGGE RRRTEIARAL TIDPKFVLLD EPFAGVDPIA VEEIQHLVAK
LKDKNIGILI TDHNVNETLS ITDRAYLMFE GKLLKSGTAE ELAEDEQVRR VYLGKHFELK
RKF