Gene Aasi_1403 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAasi_1403 
Symbol 
ID6377575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Amoebophilus asiaticus 5a2 
KingdomBacteria 
Replicon accessionNC_010830 
Strand
Start bp1786974 
End bp1788161 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content39% 
IMG OID642682475 
Productelongation factor Tu 
Protein accessionYP_001958428 
Protein GI189502711 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAAAG AAACTTTTGA TCGCTCCAAA CCACACGTTA ATATAGGTAC AATCGGACAC 
GTTGACCACG GTAAGACAAC ATTAACTGCT GCTATTACCA AAGTTTTGTC AAAAAGAGGA
CTTGCTCAAG TCAGAGACTT TGGCTCTATT GACAATGCTC CTGAAGAAAG AGAAAGAGGT
ATTACTATCA ATACTTCTCA CGTAGAATAT GAAACATCCA AAAGACACTA TGCGCACGTA
GATTGCCCAG GTCACGCAGA CTATGTGAAA AACATGATTA CAGGTGCTGC ACAAATGGAT
GGTGCTATCC TTGTGGTAGC TGCTACAGAT GGACCTATGC CACAGACAAG AGAACATATT
CTTCTTGCTT CTCAAGTAGG TGTTCCTAAT CTTGTTGTTT TTCTTAACAA AGTAGATGCA
GTGGATGATC CAGAGCTTGT TGATCTAGTA GAAGAAGAGG TTAGAGACCT TTTAAAAGCT
TACAAATTTG ATGGTGATAA TATTCCAGTT ATTCGTGGTT CAGCACTAGG TGCTCTTAAT
GGAGAGCCAG AGTGGGAAGC AAAAGTGGAA GAACTTATGG ATAACGTAGA TGAATATATT
CCATTGCCTC AAAGACTTAT TGATCGTGAC TTCTTAATGC CTGTAGAAGA TACAATGTCT
ATTACTGGAC GTGGTACTGT AGCAACTGGT AGGATAGAAA GAGGTGTTAT TAATGTTGGT
GACCCAGTTC AAATTATTGG TATGGGTGCA CAGAACCTAA ACTCTACTGT AACAGGCGTA
GAAATGTTTA GAAAACTTCT GGACAGGGGA GAAGCAGGAG ATAATGTAGG TCTTTTATTG
AGAGGTATTG ATAAGGAAAA AATTCACAGA GGAATGGTTA TTTGTAAGCC TAAATCTGTA
ACTCCACATC GCAAATTCAA AGCTGAAGTA TACGTACTAT CGAAAGAAGA AGGTGGAAGA
CATACTCCAT TCTTTAATAA ATATAGACCT CAGTTCTATT TTAGAACCAC TGACGTTACT
GGAGAAGTTA AGCTTCCAGC AGGTGTGGAA ATGGTAATGC CTGGTGATAA CATAGCTTTA
GAAGTAGAGC TTATTAACGA GATAGCTATG GAAAAAGGCT TAAGATTTGC TATACGAGAA
GGAGGTAGAA CTGTAGGAGC AGGGCAAATT ATTGAAATAT TAGATTAA
 
Protein sequence
MAKETFDRSK PHVNIGTIGH VDHGKTTLTA AITKVLSKRG LAQVRDFGSI DNAPEERERG 
ITINTSHVEY ETSKRHYAHV DCPGHADYVK NMITGAAQMD GAILVVAATD GPMPQTREHI
LLASQVGVPN LVVFLNKVDA VDDPELVDLV EEEVRDLLKA YKFDGDNIPV IRGSALGALN
GEPEWEAKVE ELMDNVDEYI PLPQRLIDRD FLMPVEDTMS ITGRGTVATG RIERGVINVG
DPVQIIGMGA QNLNSTVTGV EMFRKLLDRG EAGDNVGLLL RGIDKEKIHR GMVICKPKSV
TPHRKFKAEV YVLSKEEGGR HTPFFNKYRP QFYFRTTDVT GEVKLPAGVE MVMPGDNIAL
EVELINEIAM EKGLRFAIRE GGRTVGAGQI IEILD