| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_1323 |
|---|
| Symbol | |
|---|
| ID | 6377633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010830 |
|---|
| Strand | - |
|---|
| Start bp | 1688418 |
|---|
| End bp | 1690715 |
|---|
| Gene Length | 2298 bp |
|---|
| Protein Length | 765 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 642682407 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001958362 |
|---|
| Protein GI | 189502645 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.773498 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTAATA TAATATCGGA AAAGATCTTA CAAGGCCTGG GTATGCTGAT AGGTTGTACA
CTAATCATGT ATACCTGTGC TTGTGCTGGT GGAGATAATT TGCCTACCCC AATTCAACCC
ACTAAGCTAG CCGGACAAAG TATAACAAAA GCATTAACTT CTACAACGAA TAATCAAACT
ATTACAGATA ACCAATTGAC ACTAGCTAGT GCATCAGTGA TAGCAGGGCA AAAGGATAAT
AAAAGGAAAG AGCACGAAGA AACAGCTACG TTAGCAAGAG AGAATGGAGC CCCACTAACC
AGAAAACAAC TAACACCAAC TGAACAATTA TTGAGATTGA AGGAGGAAAA GGCAAGTGAG
AAAGAAGAGG AAGCATCTAT TAAAAAGCCA ACCAAACGTC CAAAAGTAAC AAAAGGGACC
ACATTGCCGA GCGTTTTACA AAATCTTAAC ATAGAAAAAA TTATTCAGCA ACATAAACCA
GAAAATATGG ATGGTGAATA TCGTATGATG GAAGCAGAAA AATTAGCGGA GGTTGCTAAT
AATAATGATA CCGAGGCTCA AGAAGAAGTG GTTAGCCAAT GCTTAAAAGG AACTATAACC
CCCTTATTAG CAAGCCTAAT TTCACCATAT AGATGGGAGA GAATAAAAGA GAGGGCTAGT
CAAGATGAGC GGTATATTTA TCTATTGCTT TGTTTTGCAA AACAAGCCGA TACAGCTGAT
ATATTATTAG CGCTTTTGGA GGATATTGAA AGGGATGCAG TTTCAGGAAA TGCTTTAGCG
CAAGTCAATC TAGGGTATAT GTACGAGAAG GGTATAGGGA AATTAGTTGA TTGTGACAAA
GCTATTAAAT GGTATATACC TGCAGCAGAA CAGGGACATG CCATTGGACA AAAGCTGTTA
GGAGATATGC ATTTTAGAGG TGTTGTAGAC TGTTATGATT ATAGGAAACA TGGGTGTAAG
ACTATGGAAG AATATAATGA GAAAAAGGCT GTTGAATGGT ACAAGGCGTC AATTAACCAA
GGTTATGTAC CAGCGCTAAC TAGTTTAGGA TACCTCTATC AGAGAGCAAG AAATATTTAT
CGTCGCTATC AAGGAGCAAT TGAATGCTAT AAAATAGCTG CTAAGCATGG AGATACCCAA
GCAAAATTTC ATCTAGGAGA AACTTATTAT TATGGCGAAA TGACGAATGT TATACATTAT
AGAGGAGTAA AAACCGACTA TAAAAAAGCA TTTAAATGGT ATAGCCAAGC AGCTAACGAA
GGTCATGTGG AGGCACAAGC ACAGTTGGGA CTTATGTATC ATAATGGGCA GATGGTTAAG
CGAGACCTTG TTAAGTCTGC AGAATGGTAT AAGAGAGCAG CCAAGGGAGG AAGTGAAGCT
GCTCAAATTC ATATGGGCAT GATATATAAA AAAGGACGAG GAGTGCCTAA AGATCTTGCT
CAGGCTATCT ATTGGTGTAT GCAAACCAAA CGTGCTTCTG GATTATCAAG TATTCTCAAA
GTAAAAGAGC AATTGCTATC CTTGCCAGCT ACAGTACCTA ATAGAGAAAT AGAGGAGATA
GAAAGTAAGC TGCTTAGTGA TTGGCAAGCC ATGCTTGTCC AAAGTAAATA TGATATAGAT
GGACAACATG CTAGCTTACA CGTCGGAGCG TATCAACGAT TGGAAGTAAT AATGTATCAA
TTGGTGAATT GGCGTTATCA ACTAAGTACA CAATCAGACC TAATGATTAG CTGTCTACAG
TATGTAAATA CAGAAGATAG AATAGCTATT GAAAGTTATC AAAAAGAAAC AGGAATAGTA
CCTTATGTCA AGCAACAAAG TTTAGATAAT AAAGAATATC TAAGCTTTGG AGAGAAGAAT
GTCGAAATAG CAGAAGCGAT TGTTAATGAA CTAACAGAGA AAAGACTCTA TAAAGAAGTC
CAAGCTATAC TCAAGCACCT TGAAGAGATA AGCACAATAA AACAAGATAG CCATGTAAAT
GGAACAGTTT GTACGAATGA GCCCTTAGAA AGACAGGCTT TTATATCAGC TGAAGAACAG
GATGTTGCCA AGAGTTTAAC TAGAGCTAAT AAGTCAAGTA ATATACTGTT AGAAAGTGTA
GAGTCAATTC AAAATCAAGC ACAACAATTT GATAGATATT ATAGACTATT GTTAGAAGAA
ATTGAAAAAG GACAATATGC ACGCAATGAA AAGTTTGTAG AAAAACATAT CCACGTTTTT
GATCTTTACA TAAATCACTC GCCTTACGCA AAACCTGAAT GGAAAAGGTT ATTAATAAAT
AGTATATTAT ACTCCTAA
|
|---|
| Protein sequence | MLNIISEKIL QGLGMLIGCT LIMYTCACAG GDNLPTPIQP TKLAGQSITK ALTSTTNNQT
ITDNQLTLAS ASVIAGQKDN KRKEHEETAT LARENGAPLT RKQLTPTEQL LRLKEEKASE
KEEEASIKKP TKRPKVTKGT TLPSVLQNLN IEKIIQQHKP ENMDGEYRMM EAEKLAEVAN
NNDTEAQEEV VSQCLKGTIT PLLASLISPY RWERIKERAS QDERYIYLLL CFAKQADTAD
ILLALLEDIE RDAVSGNALA QVNLGYMYEK GIGKLVDCDK AIKWYIPAAE QGHAIGQKLL
GDMHFRGVVD CYDYRKHGCK TMEEYNEKKA VEWYKASINQ GYVPALTSLG YLYQRARNIY
RRYQGAIECY KIAAKHGDTQ AKFHLGETYY YGEMTNVIHY RGVKTDYKKA FKWYSQAANE
GHVEAQAQLG LMYHNGQMVK RDLVKSAEWY KRAAKGGSEA AQIHMGMIYK KGRGVPKDLA
QAIYWCMQTK RASGLSSILK VKEQLLSLPA TVPNREIEEI ESKLLSDWQA MLVQSKYDID
GQHASLHVGA YQRLEVIMYQ LVNWRYQLST QSDLMISCLQ YVNTEDRIAI ESYQKETGIV
PYVKQQSLDN KEYLSFGEKN VEIAEAIVNE LTEKRLYKEV QAILKHLEEI STIKQDSHVN
GTVCTNEPLE RQAFISAEEQ DVAKSLTRAN KSSNILLESV ESIQNQAQQF DRYYRLLLEE
IEKGQYARNE KFVEKHIHVF DLYINHSPYA KPEWKRLLIN SILYS
|
|---|
| |