| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_1319 |
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| Symbol | |
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| ID | 6377622 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010830 |
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| Strand | - |
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| Start bp | 1682278 |
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| End bp | 1684434 |
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| Gene Length | 2157 bp |
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| Protein Length | 718 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 642682403 |
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| Product | hypothetical protein |
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| Protein accession | YP_001958358 |
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| Protein GI | 189502641 |
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| COG category | [K] Transcription |
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| COG ID | [COG0557] Exoribonuclease R |
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| TIGRFAM ID | [TIGR00358] VacB and RNase II family 3'-5' exoribonucleases
[TIGR02063] ribonuclease R |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.815351 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCAAA AACAAAAAAA TAAACAAGCA AAAAAACACA ACAATATTCG TTTGCCTGAT
CAGCACCGTT TGTTGCTAGC ATTCTTGGAA GCTGCTGCTG GAAAAGGTTT CACTTTTAGT
AGCTTGATCA AGCATTTTAA AGGTAATTTG TCTAAAGAAA ATATTAAAGA AGCGCTGGCC
GACCTAGTCA TACAAGGAGC TATTGAACGC CGTGACAGGG GTAAGTTTTT AGTGCCTTTT
AACATAGACA AGCTTCCTTA TGTAGTGGGT AAAGTAGATT ATGTAAATCC TGGTTATGCT
TATGTTGTGG TAGGCGATGG ACAGCAAGAT GTATTGGTAC GCCAAAAAGA TTTACTTTAT
GCACTAGATG GAGATGTCGT TAAGGTAGCT ATTACAAAAC AAGAAAATGG TACAAAAGGG
CACCCAGTGG GTCGTGTTGT AGAAATATTG GAGCAGAATA AGAATAAGTG GGTAGGGACA
GTACAGCAGC AAGGATCAGT AACCTTTGTG TTACCTATTA GTAGGCGTAT GCATTATGAT
ATTTTTGTAA GGCCAGAAAA TCTAAAAAAA GCGAAGCATA ATGATCGGGT AGTTGTAGAA
TTGGTTAAAA GACCTACTAC TTCTAAGAAT CCAGAAGGAA GAATAATAGA AGTATTTGGC
CCTATGGGTG AAAATGATGT AGAAATTCAT ACCATTATGG CTGAATTTAA CTTGCCTACT
CAGTTTCCTG AAAATGTATT AGCAGAAACG TCAGCTATAT CAATCGATAT TCCTAAAGAA
GAGATAGCTG CAAGGAAGGA TTTTAGAGAA GTATTTACAA TAACTATTGA TCCGGAGGAT
GCCAAGGATT TTGATGATGC TCTATCACTA AAAATATTGC CCAATGGCCA TATCGAAGTA
GGCGTACATA TTGCTGATGT GAGTTATTAT GTGCAAGAAA ATAGCCTGGT TGATCAGGAA
GCTTTTGAAC GTGGTACATC TGTATATTTA GTTGATAGAA CTATACCTAT GATTCCGGAA
AGGCTTTCTA ATGAGCTTTG TTCTTTGAAG CCTCATGAGG ACAGACCTGC GTTTTCGGCT
GTATTTGAGC TGGACAAACA AGGGAGTTTG CACCATGAAT GGTTTGGGGA AACGGTTATT
CACTCAGACC AGCGTCTTAG TTATGAGGAA GCTCAACAAG CGATTACACA GCCAACCCAC
AGCTTGCATG AGCAAATAAC CACGTTAAAC AATTTAGCTA AGAAATTACG TGCTGATAGG
TTTAAAAGTG GGGCCATTAA TTTTGATACG CCGAGCGTTA AATTTCAGCT AGATAAGCAA
GGTAGGCCGT TGAGTATACT TCCCAAAGTA AGCGAAGATA GCCATAGGCT TATTGAAGAG
TTTATGTTAC TCGCCAATAA ACGGGTGGCT TTACATGTGC GACGTATGAA GCAAGGTAAA
CAATTTCCTA CTTTTGTATA TAGAACGCAT GATCAACCGA ATTTAGAAAG ATTAGGAGAT
TTTGCGCTTT TTGTTAAGCA GTTTGGTTAT TCTATTAAAG CTGAACCACA GGAAATTGCC
CAATCTATTA ATGTGCTTTC TGAAGGTTTG GCTGGTAAGC CCGAGGCCCA TATTATACAG
ACGCTAGCCA TTCGTCTAAT GGCTAAAGCA TTATACACTA CAGAAGCTAA ACCTCATTTT
GGGCTGGCTT TTGAACACTA TACTCATTTT ACTTCTCCTA TTAGGCGTTA TCCTGACTTA
TTAGTACACC GGTTGCTTAA AAAATATCTG AAAGGTGAAT TTTATTTTGA AGAAGCTATA
TATGAGAAGA AATGCCAACA TGCTTCTGAA CGTGAACGCG TGGCTGCAGA TGCAGAACGT
GCTTCTATCA AATATAAACA GGTAGAGTTA ATGCAAACTT TACAGGGAAA ACGTTTAAAA
GGTGTTATAA GTAGCTTGAT GGAGTGGGGC ATTTATGTGG AACTCTTGGA TATCCTGTGT
GAGGGAATGA TTCGCTTGTC TGATTTGACA GACGACTACT ATGTGCTGGA TAAAAAAGGA
TTTAAGTTGG TAGGGGAGCG CACTAAAAAG GTTTACCAGT TAGGCGATTT GGTAGAAGTT
GAAATTAAAG CTTGTGATAT TTCTAAAAGG ACTGTTGACT TATGGTTGGT TGGATAA
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| Protein sequence | MSQKQKNKQA KKHNNIRLPD QHRLLLAFLE AAAGKGFTFS SLIKHFKGNL SKENIKEALA
DLVIQGAIER RDRGKFLVPF NIDKLPYVVG KVDYVNPGYA YVVVGDGQQD VLVRQKDLLY
ALDGDVVKVA ITKQENGTKG HPVGRVVEIL EQNKNKWVGT VQQQGSVTFV LPISRRMHYD
IFVRPENLKK AKHNDRVVVE LVKRPTTSKN PEGRIIEVFG PMGENDVEIH TIMAEFNLPT
QFPENVLAET SAISIDIPKE EIAARKDFRE VFTITIDPED AKDFDDALSL KILPNGHIEV
GVHIADVSYY VQENSLVDQE AFERGTSVYL VDRTIPMIPE RLSNELCSLK PHEDRPAFSA
VFELDKQGSL HHEWFGETVI HSDQRLSYEE AQQAITQPTH SLHEQITTLN NLAKKLRADR
FKSGAINFDT PSVKFQLDKQ GRPLSILPKV SEDSHRLIEE FMLLANKRVA LHVRRMKQGK
QFPTFVYRTH DQPNLERLGD FALFVKQFGY SIKAEPQEIA QSINVLSEGL AGKPEAHIIQ
TLAIRLMAKA LYTTEAKPHF GLAFEHYTHF TSPIRRYPDL LVHRLLKKYL KGEFYFEEAI
YEKKCQHASE RERVAADAER ASIKYKQVEL MQTLQGKRLK GVISSLMEWG IYVELLDILC
EGMIRLSDLT DDYYVLDKKG FKLVGERTKK VYQLGDLVEV EIKACDISKR TVDLWLVG
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