| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_1217 |
|---|
| Symbol | |
|---|
| ID | 6377248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010830 |
|---|
| Strand | - |
|---|
| Start bp | 1551922 |
|---|
| End bp | 1556130 |
|---|
| Gene Length | 4209 bp |
|---|
| Protein Length | 1402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 642682315 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001958273 |
|---|
| Protein GI | 189502556 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 2 |
|---|
| Fosmid unclonability p-value | 0.000000624156 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAACA ATTATACTCT TGCACAGCAA CTTATAGCTC GTATTCTACT TATAGGTTTA
TGTTTACAAA GCTGTGGTGG AGGATTCGAC AATAAACCAC TTATTACAAC CAATATCCAG
CGTTTGATAG GTCAAGTATT GACAGCAGAA GGTGGCCATG CTGTTAGTTT TTATGAAGAA
GGTGGTGATT TAAAGGCAGA TGTGGAGATG AATGCTTATA AAGGATTTAG TAAAACTTAT
GAAGGGGTAG AAGTAACCCT TGAACAAGGA GTAGAGCTCG CTAAATTACC TTGCTTAGAT
ACAAAAGCAC AAGAGCGCCG TATCCGCCTT CAACTAGCTC AAGACAACCA GCCAGCTAAA
ATAGTTGTTT ACAAAGGAGC AGGCTTGATG GGTGGTGGCA ACCCTGATTC TGATGGACAG
AAAGAAGGAA GCGAGGAAGA GGAAGAAGAG GACCAATCAG ATGTACAAAC CCAAGTAGAT
AACATACAAC AATTAACCAC TGCTGCTTCC TTACATACAG CTACTGAACA GAGGGATATA
AATAAGATTA AAGAGTTGGT AAATGCAGGT GTTAATATAA ACCTTAAGGA TAACAATAGT
TGGACGCCCT TACATAAGGC TGCTCAGAAA GGTCATATAG ATGTAGCAGC GTTCTTAATA
AGTTTAGGAG CAGATGTCAA TGCTAGAGAC AATAATGGAA TAACCCCTTT GTATGTGGCT
GCTCTGCTAG GCCACTTAGA GTTAATTAGG TATTTGATAG CTTTTGGTGC TAATGTAAAT
GCTAAGAATA TAAATGGGAA CACACCTTTG TATATGGCTG CTTTAAAAGG CAACCTAGCC
CTAGTTAGGT ATTTAATAGA GCAAGGGGCG GATATAAATG ATAAGGACAA TAATGGTTCT
ACTCCACTCT ATATAGCTAT TCTCAAAGGA CATATAGAAG TAGCCAAACA ATTAGTGATA
TTAGGCGCTG ATGTGCAGGA TAATTTATTT GGAGCTGCCA AGAAAGGAAA TTTAGAAGTT
TCTAAGCAAT TAATCCAACT AGGGGCCCAT ATTAATGCTA AGGATAATAG CGGCTATATC
CCTTTACATA AAGCTGCTTT AAATGGGCAC CTAGAAGTAG CTAAACTGTT AATAGAATCA
GGGGCTGATG TCAATGCTAA AAATATTCAT GGTGATACGC CTTTGCATTG GGCTGCTGAG
GAGGGGCACC TAGAAGTAGC TAAACTGTTA ATAGAATCAG GAGCTGATGT CAATGCTAAA
GGCAATAATG GAATAACCCC TTTGTATGTG GCTGCTGAGG AGGAACACCT AGAAGTAGCT
AAACTGTTAA TAGAATCAGG AGCTGATGTC AATGCTAAAG GCAATAATGG AATAACCCCT
TTGTATGTGG CTGCTGAGGA GGAACACCTA GAAGTAGCTA AACTGTTAAT AGAATCAGGG
GCTGGCCAGG GAGATGCAGA GACACAATAT AACATAGGCA GAATGTATAG AAATGGACGT
GGCACAGCTC AAGATGACGC GAAAGCAGTA GAATGGTTTC AAAAAGCAGC TGACCAAGGA
AATGCAAGTG CACAATATAA TCTAGGACGG ATGTATAGAG ATGGACGAGG CGTAGCCCAA
GATGATAAAA AAGCTGTAGA ATGGTATCAA AAAGCAGCTG ATCAAGGAAA TGCAAGTGCA
CAAGCTAATC TAGGATGGAT GTATAAAAAT GGACTTGGGG TAGCACAAGA TGACGCGAAA
GCTGTAGAAT GGTATCAAAA AGCGGCTGAT CAAGGAGATA CTATTGCACA AAACAATCTA
GGTAATAGGT ATAGAGATGG ACGAGGTGTA GCCCAAGATG ATAAAAAGGC AGTAGAATGG
TATCAAAAAG CGGCTGAGCA AGGACAGGTG GATGCACAAA ATAGTCTAGG AGTGATGTAT
GATGATGGAG AAGGATTAGA GAAGGATGAT AAAAAAGCAT TTGAATGGTA CCAAAAAGCG
GCTGAGCAAG GACATGTAAC AGCACAATAT AATTTAGGAG TGAGATATGG AAATGGACGA
GGAGTAGCTA AAGATGAAAG GAAAGCAGCA GAATGGTTTC AAAAAGCTGC TGGGCAAGGA
AATGCAAGTG CACAATATAA TCTAGGACGG ATGTATGATG ATGGAGAAGG ATTAGAGAAG
GATCATGCTA AAGCAGTGGT ATGGTACACT AAGGCAGCTG AGCAAGGACA TATAAATGCA
CAATATAATT TAGGTATAAG CTATGAGGAT GGCGAAGGAG TTGAAAAGGA TGATAATAAA
GCAAGAGAAT GGTATCAAAA GGCTGCTGAT CAAGGAGATA CTGATGCACA ATATAAGCTA
GGTATAATAT ATAGAAATGG ACGAGACGTA GCTCAAGATG ACCGAAAAGC AGTAGAATGG
TTCCAAAAAG CCGCTGAGCA AGGCCTTGCA AGTGCACAAT ATAGTCTAGG ATTTATGTAT
TATAATGGGT ATGGTGTAGT TCAAGATGAC GCGAAAGCAG CAGAATGGTT TCAAAAAGCT
GCTGGGCAAG GAAATGCAAG TGCACAATAT AATCTAGGAC GGATGTATAG AGAGGGACGA
GGCGTAGCCC AAGATGATAA AAAAGCTGTA GAATGGTACG GAAAAGCTGC TGAGCAAGGA
CAGGTGGATG CACAAAATAG TCTAGGTGCA ATGTATTACA ATGGACATGG CGTAGCCCAA
GATGATCGGA AAGCAGTAGA ATGGTTCCAA AAAGCTGCTG AGAAAGGAAA TGTATTAGCA
CAAAATAGTC TAGGATGTAT GTATAAAAAT GGATGGGGAG TAGCCCAAGA TGATAAAAAA
GCTGTAGAAT GGTACGGAAA AGCTGCTGAG CAAGGACAGG TGGATGCACA AAATAGTCTA
GGATGTATGT ATAAAAATGG ATGGGGAGTA GCACAAGATG ATCGAAAAGC AGTAGAATGG
TTCCAAAAAG CTGCTGAGAA AGGAAATGTA TTAGCACAAA ATAGTCTAGG ATGTATGTAT
AAAAATGGAT GGGGAGTAGC ACAAGATGAT CGAAAAGCAG TAGAATGGTT CCAAAAAGCT
GCTGAGAAAG GAAATGCAAG TGCACAATAT AGTCTAGGAT GTATGTATAG AGAAGGGCGT
GGCATAGCCC AAGATGATCG GAAAGCTGTA GAATGGTATC AAAAAGCTGC TGAGAAAGGA
GATGTATTAG CACAAAATAA TCTAGGATGG ATGTATGAAA ATGGGCGTGG CGTAGTCCAA
GATGGCGCGA AAGCTGTAGA ATGGTATCAA AAAGCGGCTG AGCAAGGAAA TGTATTAGCA
CAAAATAGTC TAGGATGTAT GTATAGAGAG GGGCGTGGCG TAGCCCAAGA TGGTAAAAAA
GCAGTAGAAT GGTTTCAAAA AGCTGCTGAG CAAGGAAATG TATTAGCACA AAATAGTCTA
GGATGGATGT ATAGAGAGGG ACGAGGCGTA GCCCAAGATG ATCGAAAAGC AGTAGAATGG
CATCAAAAAG CCGCTGAGCA AGGACATGCA AGTGCACAAA ATAGTCTAGG ATTTATGTAT
AGAGAGGGGC GAGGCGTAGT CCAAGATGAC GCGAAAGCTG TAGAATGGTA TCAAAAAGCT
GCTGATCAAG GAAATGCAAG TGCACAAAAT AGTCTAGGAT TTATGTATAG AGAGGGGCGA
GGCGTAGTCC AAGATGATAA AAAAGCTGTA GAATGGTACC AAAAAGCTGC TGAGCAAGGA
AATGCAAGTG CACAATATAG TCTAGGATTT ATGTATAGAG AGGGGCGAAG CGTAGTCCAA
GATGATCGAA AAGCAGTAGA ATGGTATCAA AAAGCTGCTG AGCAAGGACA TGCAAGTGCA
CAAAATAGTC TAGGATGGAT GTATGAAAAT GGGCGAGGCG TAGCCCAAGA TGATATAAAA
GCAGTAGAAT GGTATCAAAA AGCTGCTGAG CAAGGAAATA TAGATGCACA AAACAATCTA
GGATTTATGT ATTATAGGGA TGGACGATGC CGAGGCGTAG CCCTAGTTGA TAGAAAAGCA
GTAGAATGGT TCGAAAAAGC TGCTGAGCAA GGAAATGCAA GTGCACAATA TAGTCTAGGA
TGGATGTATT ATAATGGGTA TGGCGTAGCC CAAGACTATG CTAAAGCTTT AGAATGGTTC
CAAAAAGCTG CTGAGCAAGG ACAAGTGGAT GCACAAAAGA TTCTAGATAA GTTGAAGAAT
TTAAATTAA
|
|---|
| Protein sequence | MKNNYTLAQQ LIARILLIGL CLQSCGGGFD NKPLITTNIQ RLIGQVLTAE GGHAVSFYEE
GGDLKADVEM NAYKGFSKTY EGVEVTLEQG VELAKLPCLD TKAQERRIRL QLAQDNQPAK
IVVYKGAGLM GGGNPDSDGQ KEGSEEEEEE DQSDVQTQVD NIQQLTTAAS LHTATEQRDI
NKIKELVNAG VNINLKDNNS WTPLHKAAQK GHIDVAAFLI SLGADVNARD NNGITPLYVA
ALLGHLELIR YLIAFGANVN AKNINGNTPL YMAALKGNLA LVRYLIEQGA DINDKDNNGS
TPLYIAILKG HIEVAKQLVI LGADVQDNLF GAAKKGNLEV SKQLIQLGAH INAKDNSGYI
PLHKAALNGH LEVAKLLIES GADVNAKNIH GDTPLHWAAE EGHLEVAKLL IESGADVNAK
GNNGITPLYV AAEEEHLEVA KLLIESGADV NAKGNNGITP LYVAAEEEHL EVAKLLIESG
AGQGDAETQY NIGRMYRNGR GTAQDDAKAV EWFQKAADQG NASAQYNLGR MYRDGRGVAQ
DDKKAVEWYQ KAADQGNASA QANLGWMYKN GLGVAQDDAK AVEWYQKAAD QGDTIAQNNL
GNRYRDGRGV AQDDKKAVEW YQKAAEQGQV DAQNSLGVMY DDGEGLEKDD KKAFEWYQKA
AEQGHVTAQY NLGVRYGNGR GVAKDERKAA EWFQKAAGQG NASAQYNLGR MYDDGEGLEK
DHAKAVVWYT KAAEQGHINA QYNLGISYED GEGVEKDDNK AREWYQKAAD QGDTDAQYKL
GIIYRNGRDV AQDDRKAVEW FQKAAEQGLA SAQYSLGFMY YNGYGVVQDD AKAAEWFQKA
AGQGNASAQY NLGRMYREGR GVAQDDKKAV EWYGKAAEQG QVDAQNSLGA MYYNGHGVAQ
DDRKAVEWFQ KAAEKGNVLA QNSLGCMYKN GWGVAQDDKK AVEWYGKAAE QGQVDAQNSL
GCMYKNGWGV AQDDRKAVEW FQKAAEKGNV LAQNSLGCMY KNGWGVAQDD RKAVEWFQKA
AEKGNASAQY SLGCMYREGR GIAQDDRKAV EWYQKAAEKG DVLAQNNLGW MYENGRGVVQ
DGAKAVEWYQ KAAEQGNVLA QNSLGCMYRE GRGVAQDGKK AVEWFQKAAE QGNVLAQNSL
GWMYREGRGV AQDDRKAVEW HQKAAEQGHA SAQNSLGFMY REGRGVVQDD AKAVEWYQKA
ADQGNASAQN SLGFMYREGR GVVQDDKKAV EWYQKAAEQG NASAQYSLGF MYREGRSVVQ
DDRKAVEWYQ KAAEQGHASA QNSLGWMYEN GRGVAQDDIK AVEWYQKAAE QGNIDAQNNL
GFMYYRDGRC RGVALVDRKA VEWFEKAAEQ GNASAQYSLG WMYYNGYGVA QDYAKALEWF
QKAAEQGQVD AQKILDKLKN LN
|
|---|
| |