| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aasi_1180 |
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| Symbol | |
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| ID | 6377422 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Amoebophilus asiaticus 5a2 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010830 |
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| Strand | - |
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| Start bp | 1514466 |
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| End bp | 1515140 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 642682283 |
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| Product | hypothetical protein |
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| Protein accession | YP_001958242 |
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| Protein GI | 189502525 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.222987 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCGATA AAAAGGAATT TAAAAGCTAC GCAGTCAAAG ATAGGCATAT CAGCAGCATG
CATGTTGATA AATATATAGA TCATATAGAA AATATGACTC GTAGTGTTAT TGAAGAACGT
CCAACACATT TTAGGGAAAT CGATGTTTTT TCAAGACTTA TTATGGATAG GATTATCTTT
TTAGGTATGC CTGTAGATGA TCATATTTCC AATATTATTG TAGCACAGCT TTTATTTTTG
GAGTCAACAG ATCCTAAAAA GGATGTCCGC TTGTATATTA ATAGCCCAGG TGGTTCTGTA
TATCCAGGTT TAGGTATTTA CGATACTATG CAGTATATTG CTCCAGATGT ACATACTATA
TGTACCGGCT TGGCAGCTTC TATGGCAGCT GTATTACTAG CAGGCGGTGC ACACAAGAAA
CGTTATGCCT TACCGCATTC ACGAATCTTA ATCCATCAGC CATTAGGAGG AGCTCAAGGC
CAGGCATCTG ATATGGAAAT TACTGTTAAG CAGATGTTGG AAATAAAAAG AGATCTTTAT
CAAATTCTTG CTAAACATAC AGGAAAAAGC CAAGGAAAGC TAGAAAAAGA CGGAGATCGA
GACTATTGGA TGCGTGCTTC AGAAGCAAAA GAGTATGGCA TTATTGATGA AGTATTAGAA
AAAAACAATC AATAA
|
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| Protein sequence | MLDKKEFKSY AVKDRHISSM HVDKYIDHIE NMTRSVIEER PTHFREIDVF SRLIMDRIIF
LGMPVDDHIS NIIVAQLLFL ESTDPKKDVR LYINSPGGSV YPGLGIYDTM QYIAPDVHTI
CTGLAASMAA VLLAGGAHKK RYALPHSRIL IHQPLGGAQG QASDMEITVK QMLEIKRDLY
QILAKHTGKS QGKLEKDGDR DYWMRASEAK EYGIIDEVLE KNNQ
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