Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Aasi_0954 |
Symbol | |
ID | 6377105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Amoebophilus asiaticus 5a2 |
Kingdom | Bacteria |
Replicon accession | NC_010830 |
Strand | - |
Start bp | 1229372 |
End bp | 1231888 |
Gene Length | 2517 bp |
Protein Length | 838 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 642682080 |
Product | hypothetical protein |
Protein accession | YP_001958041 |
Protein GI | 189502324 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGGCAT TGATATCAAG AAAATACTTA CAGATTGCAG GCAGGCGCAT AGCACTCATA TTAACCTTAC ACATGGCTTC TTGTACTAGC AATGTAGACA ACTCTTATCA AGAGGACAAT GATATTGTTA TGGAAATACC TTTCACTAAT ATAGTAGGAG AAGAAAAAAA TATAGAAGCT AGCTTTAGCC TTGCTCAACA TGCAACAAGT ACTAGACTTG ATAGGTATCA ATTAAAAATT ACGCTTACTG GTAGTGAGAA CGAGCTGTAC TATAGTTATT CAGGAAGAGC GCTTAAAAGT GTACCAAGTA AGTCTATAAG CTTAAGTTCT TTAACACAAA CCAACGTATT AGATACAGAA GATGAAGCCC TAATTGTAAA TTTTAGTCTG CTACCAGCTG TGGATGTTAA TGCAGTAAGC ATCACTTTTG AGCTTTTGAA TAGTGCAGGT GCTACTATCC AACAACATAC TGTAAGCTGG ATTAAAAATA CCAACCAGAG TCCCATAGAA TTCTTGACGC GCCCTTGCAA AATAGTACAA GAAAGTATTG AAACGCTGCC CCCTACAACT GACAAACAAC CCTTCCCAGA CACTGCATTG CTGCCAATCA TGCAAGAAGA TACAGCAAGC AAACAATATG AAGCTGCTAT TAGAGAAAAT AAAGATGATG CGAAAAGCAA CAAACGTCCA AGAGTAAAAG AATCTGCTAG TGCTTCAAAG AAAGCAAAAA CAGAAGCAAT ACACAACCAA CAAAGTAGCA CAGAAATTAT TCTTGCTCAG TACAGTGCTA TGGATACAAG TAAATTGGCT GAATTAGCTA ACACCAATGA TGCCCTCGCA CAGGAAGAAA TTATTACCCG TTACTCAAAA ATAAAAATAC CTCCGCTTAT GCAAAGCCTC GTTGATCCTT TTAGCTGGCA AGGCATACAA GCAAAACTTC AAGAGGATGA GCGGTATGTT TATTTCTTGT TACATTTCTC CAAACAAGCA AAAGATCATA CTATATATAG AGAGATTGTT AGTAGTGTAA AGGCATATGC ACGAGCAGGA AATACTTTAG CACAAACCAA TTTAGGGCTT ATGTATAAAA AAGGGTTGGG CGTTAAGCGT GATTATAAAA AAGCAATAGA ATGGTATACA AAGGCCGCCA ATCAAGGAAA CATAGCTGCA CAGAACAGTT TGGGATATAT ATATAAAGAA GGTAAAGGCG TTGATCCTAA TTATGAAAAA GCAATAGAAT GGTATACAAA GGCTGCCGAT CAAGGCAATA CAGTTGCACA ATATAATTTA GGAATCATCT ATAAACAGGA AGAAGGTACT GTATGCGATT ATCAAGAATC AATCAAATGG CTTACCAAAG CTGCTAACCA AAAAAATTCA TATGCCCAAA CCAGTTTAGG ACATATGTAC TATCATGGAA AGGGTGTTCG ACAAGACTAT CAGAAAGCAA TAGAATGGTA TATTAAAGCA GCGAACCAAG GCAACAGAGA TGCACAAGAT AGTCTAGGTT ATATTTATTA TAATGCTAAA GGAGTTGAGC GTGATTATGA AAAAGCGAGG AAATGGTATG AAAAGGCTGC TAAGCAAGGT GATAGAAATT CACAAACCTA TTTAGGAATT ATGTATAAAA AAGGTCAAGG AACAGACAAG GACCTTGCGC ATGCTATCTA TTGGTTTATG AAAGCTAGAA ATGAAGCGGA GTTATTACGT ATTTTCAAAC TTAAATCGTT CCTACCCTTA AAAGAAAAAA TATATGCCAC AGAAATGGAT GGAATTGAAG GCACCTTGCT TAGTAACTGG CAAGCCTTGC TGATACAAAA AGAACGGGAT CGGGCAGATA GACATGCTAC TTTACATGGC GAAGCTTATA GACAACTTGA AGAAACAATG GCGCAATTTA TAGGCTGGCG TCATCAACTA TATACACAAC CTAAGTTGAT GGTTAGCTGT GTGCGCTTAC GAAAACCGAA ATACATAACT ACGATCGAGA ATCATCAAAA AGAAACAGGT ATAATACCCT ACATCAAGCA ACATATACTC CATAATAACG TATATTCGAG CTTTGGGAAA AAGAATGTTG TATTAGCAGA AGCCATTGTT AATGAGCTAA TTAATAAGAC GCTCTGTAAC CAAACCCATA ATATACTCAA GCAGATAGAG GAAACCTATA AAATGGCACA GATGAAAGCT GTAAGTGAAG CAGCCTATAT AGAGGAGGCT TTACAGATGG ATGGTTTAAC ACCAACAGAA GAAGCAGACC TTGCTAAGAA CTTAGCTAGA GCTAATAAGT TAGCTGCTAT ATTCCTGCAA AAAGTACAGT CCCTTCAAGA AGAAGCTTAT CAATTTAATA GATATTGTAC GTTACTACCA GAAGACATTC AGAACAGACA ATATGAGCGC AACCAGAGGT TTAAGGAAAA ATATGCTTAT CTATTCGATT ATAAACGAAA CCAAATGGTT CAAGAAGATG AGGTATTTGA TTTTGATAAT GAAGACAGTC TTCTTGCTTT TAGTTAG
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Protein sequence | MKALISRKYL QIAGRRIALI LTLHMASCTS NVDNSYQEDN DIVMEIPFTN IVGEEKNIEA SFSLAQHATS TRLDRYQLKI TLTGSENELY YSYSGRALKS VPSKSISLSS LTQTNVLDTE DEALIVNFSL LPAVDVNAVS ITFELLNSAG ATIQQHTVSW IKNTNQSPIE FLTRPCKIVQ ESIETLPPTT DKQPFPDTAL LPIMQEDTAS KQYEAAIREN KDDAKSNKRP RVKESASASK KAKTEAIHNQ QSSTEIILAQ YSAMDTSKLA ELANTNDALA QEEIITRYSK IKIPPLMQSL VDPFSWQGIQ AKLQEDERYV YFLLHFSKQA KDHTIYREIV SSVKAYARAG NTLAQTNLGL MYKKGLGVKR DYKKAIEWYT KAANQGNIAA QNSLGYIYKE GKGVDPNYEK AIEWYTKAAD QGNTVAQYNL GIIYKQEEGT VCDYQESIKW LTKAANQKNS YAQTSLGHMY YHGKGVRQDY QKAIEWYIKA ANQGNRDAQD SLGYIYYNAK GVERDYEKAR KWYEKAAKQG DRNSQTYLGI MYKKGQGTDK DLAHAIYWFM KARNEAELLR IFKLKSFLPL KEKIYATEMD GIEGTLLSNW QALLIQKERD RADRHATLHG EAYRQLEETM AQFIGWRHQL YTQPKLMVSC VRLRKPKYIT TIENHQKETG IIPYIKQHIL HNNVYSSFGK KNVVLAEAIV NELINKTLCN QTHNILKQIE ETYKMAQMKA VSEAAYIEEA LQMDGLTPTE EADLAKNLAR ANKLAAIFLQ KVQSLQEEAY QFNRYCTLLP EDIQNRQYER NQRFKEKYAY LFDYKRNQMV QEDEVFDFDN EDSLLAFS
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